Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00970

Experiment: 2-furoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00968 and H281DRAFT_00969 are separated by 208 nucleotidesH281DRAFT_00969 and H281DRAFT_00970 are separated by 129 nucleotidesH281DRAFT_00970 and H281DRAFT_00971 are separated by 12 nucleotides H281DRAFT_00968: H281DRAFT_00968 - MFS transporter, NNP family, nitrate/nitrite transporter, at 1,084,630 to 1,085,997 _00968 H281DRAFT_00969: H281DRAFT_00969 - Type IV pili methyl-accepting chemotaxis transducer N-term, at 1,086,206 to 1,086,799 _00969 H281DRAFT_00970: H281DRAFT_00970 - putative Mg2+ transporter-C (MgtC) family protein, at 1,086,929 to 1,087,417 _00970 H281DRAFT_00971: H281DRAFT_00971 - Outer membrane protein (porin), at 1,087,430 to 1,088,599 _00971 Position (kb) 1086 1087 1088Strain fitness (log2 ratio) -1 0 1at 1086.115 kb on + strandat 1086.499 kb on - strand, within H281DRAFT_00969at 1086.541 kb on - strand, within H281DRAFT_00969at 1086.814 kb on + strandat 1086.927 kb on - strandat 1086.927 kb on - strandat 1087.003 kb on - strand, within H281DRAFT_00970at 1087.038 kb on + strand, within H281DRAFT_00970at 1087.039 kb on - strand, within H281DRAFT_00970at 1087.569 kb on + strand, within H281DRAFT_00971at 1087.569 kb on + strand, within H281DRAFT_00971at 1087.570 kb on - strand, within H281DRAFT_00971at 1087.570 kb on - strand, within H281DRAFT_00971at 1087.657 kb on - strand, within H281DRAFT_00971at 1087.816 kb on - strand, within H281DRAFT_00971at 1088.019 kb on + strand, within H281DRAFT_00971at 1088.019 kb on + strand, within H281DRAFT_00971at 1088.103 kb on + strand, within H281DRAFT_00971at 1088.246 kb on - strand, within H281DRAFT_00971at 1088.280 kb on + strand, within H281DRAFT_00971at 1088.280 kb on + strand, within H281DRAFT_00971

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-furoic (C)
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1,086,115 + +0.4
1,086,499 - H281DRAFT_00969 0.49 -0.0
1,086,541 - H281DRAFT_00969 0.56 +0.2
1,086,814 + +0.9
1,086,927 - -0.3
1,086,927 - +0.5
1,087,003 - H281DRAFT_00970 0.15 +0.4
1,087,038 + H281DRAFT_00970 0.22 +0.2
1,087,039 - H281DRAFT_00970 0.22 +1.0
1,087,569 + H281DRAFT_00971 0.12 -0.6
1,087,569 + H281DRAFT_00971 0.12 +1.0
1,087,570 - H281DRAFT_00971 0.12 +1.1
1,087,570 - H281DRAFT_00971 0.12 +0.2
1,087,657 - H281DRAFT_00971 0.19 +0.5
1,087,816 - H281DRAFT_00971 0.33 +0.3
1,088,019 + H281DRAFT_00971 0.50 +0.2
1,088,019 + H281DRAFT_00971 0.50 +0.8
1,088,103 + H281DRAFT_00971 0.58 -0.7
1,088,246 - H281DRAFT_00971 0.70 -1.1
1,088,280 + H281DRAFT_00971 0.73 -0.6
1,088,280 + H281DRAFT_00971 0.73 +0.8

Or see this region's nucleotide sequence