Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20940 and BWI76_RS20945 are separated by 95 nucleotides BWI76_RS20945 and BWI76_RS20950 overlap by 63 nucleotides BWI76_RS20950 and BWI76_RS20955 are separated by 54 nucleotides BWI76_RS20955 and BWI76_RS20960 are separated by 9 nucleotides
BWI76_RS20940: BWI76_RS20940 - uracil/xanthine transporter, at 4,377,577 to 4,378,866
_RS20940
BWI76_RS20945: BWI76_RS20945 - uracil phosphoribosyltransferase, at 4,378,962 to 4,379,588
_RS20945
BWI76_RS20950: BWI76_RS20950 - hypothetical protein, at 4,379,526 to 4,379,716
_RS20950
BWI76_RS20955: BWI76_RS20955 - 6-phospho-beta-glucosidase, at 4,379,771 to 4,381,201
_RS20955
BWI76_RS20960: BWI76_RS20960 - ROK family protein, at 4,381,211 to 4,382,104
_RS20960
Position (kb)
4379
4380
4381
4382 Strain fitness (log2 ratio)
-2
-1
0
1 at 4379.050 kb on + strand, within BWI76_RS20945 at 4379.060 kb on - strand, within BWI76_RS20945 at 4379.261 kb on + strand, within BWI76_RS20945 at 4379.477 kb on - strand, within BWI76_RS20945 at 4379.701 kb on + strand at 4379.701 kb on + strand at 4379.709 kb on - strand at 4379.943 kb on - strand, within BWI76_RS20955 at 4380.026 kb on - strand, within BWI76_RS20955 at 4380.122 kb on + strand, within BWI76_RS20955 at 4380.301 kb on - strand, within BWI76_RS20955 at 4380.302 kb on - strand, within BWI76_RS20955 at 4380.324 kb on + strand, within BWI76_RS20955 at 4380.359 kb on + strand, within BWI76_RS20955 at 4380.359 kb on + strand, within BWI76_RS20955 at 4380.367 kb on - strand, within BWI76_RS20955 at 4380.522 kb on - strand, within BWI76_RS20955 at 4380.765 kb on - strand, within BWI76_RS20955 at 4380.870 kb on + strand, within BWI76_RS20955 at 4381.207 kb on + strand at 4381.291 kb on + strand at 4381.419 kb on + strand, within BWI76_RS20960 at 4381.427 kb on - strand, within BWI76_RS20960 at 4381.475 kb on - strand, within BWI76_RS20960 at 4381.839 kb on - strand, within BWI76_RS20960 at 4381.839 kb on - strand, within BWI76_RS20960
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 4,379,050 + BWI76_RS20945 0.14 -1.0 4,379,060 - BWI76_RS20945 0.16 -0.5 4,379,261 + BWI76_RS20945 0.48 -0.2 4,379,477 - BWI76_RS20945 0.82 -1.4 4,379,701 + -0.6 4,379,701 + -0.0 4,379,709 - +0.3 4,379,943 - BWI76_RS20955 0.12 +0.1 4,380,026 - BWI76_RS20955 0.18 -1.7 4,380,122 + BWI76_RS20955 0.25 -0.1 4,380,301 - BWI76_RS20955 0.37 -0.1 4,380,302 - BWI76_RS20955 0.37 +0.3 4,380,324 + BWI76_RS20955 0.39 -1.8 4,380,359 + BWI76_RS20955 0.41 +0.8 4,380,359 + BWI76_RS20955 0.41 +0.5 4,380,367 - BWI76_RS20955 0.42 -0.3 4,380,522 - BWI76_RS20955 0.52 +0.5 4,380,765 - BWI76_RS20955 0.69 +0.1 4,380,870 + BWI76_RS20955 0.77 -0.1 4,381,207 + -0.3 4,381,291 + +0.5 4,381,419 + BWI76_RS20960 0.23 +0.1 4,381,427 - BWI76_RS20960 0.24 +0.2 4,381,475 - BWI76_RS20960 0.30 +0.6 4,381,839 - BWI76_RS20960 0.70 +0.3 4,381,839 - BWI76_RS20960 0.70 -0.2
Or see this region's nucleotide sequence