Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16700 and BWI76_RS16705 are separated by 74 nucleotides BWI76_RS16705 and BWI76_RS16710 are separated by 496 nucleotides BWI76_RS16710 and BWI76_RS16715 are separated by 66 nucleotides
BWI76_RS16700: BWI76_RS16700 - ABC transporter ATP-binding protein, at 3,456,522 to 3,457,487
_RS16700
BWI76_RS16705: BWI76_RS16705 - glucose dehydrogenase, at 3,457,562 to 3,459,967
_RS16705
BWI76_RS16710: BWI76_RS16710 - cyclic nucleotide-binding protein, at 3,460,464 to 3,460,693
_RS16710
BWI76_RS16715: BWI76_RS16715 - hypothetical protein, at 3,460,760 to 3,461,668
_RS16715
Position (kb)
3457
3458
3459
3460 Strain fitness (log2 ratio)
-2
-1
0
1 at 3457.530 kb on - strand at 3457.580 kb on + strand at 3457.772 kb on + strand at 3457.901 kb on - strand, within BWI76_RS16705 at 3458.352 kb on + strand, within BWI76_RS16705 at 3458.675 kb on - strand, within BWI76_RS16705 at 3458.739 kb on + strand, within BWI76_RS16705 at 3459.124 kb on + strand, within BWI76_RS16705 at 3459.688 kb on + strand, within BWI76_RS16705 at 3459.771 kb on - strand at 3459.803 kb on - strand at 3459.847 kb on - strand at 3460.060 kb on - strand at 3460.072 kb on + strand at 3460.072 kb on + strand at 3460.072 kb on + strand at 3460.072 kb on + strand at 3460.072 kb on + strand at 3460.072 kb on + strand at 3460.080 kb on - strand at 3460.080 kb on - strand at 3460.080 kb on - strand at 3460.080 kb on - strand at 3460.252 kb on + strand at 3460.258 kb on - strand at 3460.354 kb on + strand at 3460.391 kb on - strand at 3460.416 kb on + strand at 3460.419 kb on + strand at 3460.424 kb on - strand at 3460.424 kb on - strand at 3460.470 kb on - strand at 3460.481 kb on - strand at 3460.520 kb on + strand, within BWI76_RS16710 at 3460.528 kb on - strand at 3460.637 kb on - strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.647 kb on + strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.655 kb on - strand, within BWI76_RS16710 at 3460.664 kb on - strand at 3460.693 kb on + strand at 3460.698 kb on + strand at 3460.698 kb on + strand at 3460.698 kb on + strand at 3460.698 kb on + strand at 3460.698 kb on + strand at 3460.725 kb on + strand at 3460.728 kb on - strand at 3460.733 kb on - strand at 3460.812 kb on - strand at 3460.813 kb on - strand at 3460.821 kb on - strand at 3460.830 kb on - strand at 3460.831 kb on - strand at 3460.831 kb on - strand at 3460.863 kb on + strand at 3460.871 kb on - strand, within BWI76_RS16715 at 3460.871 kb on - strand, within BWI76_RS16715 at 3460.871 kb on - strand, within BWI76_RS16715 at 3460.881 kb on - strand, within BWI76_RS16715 at 3460.920 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,457,530 - +1.0 3,457,580 + +0.1 3,457,772 + +0.1 3,457,901 - BWI76_RS16705 0.14 +1.6 3,458,352 + BWI76_RS16705 0.33 +0.3 3,458,675 - BWI76_RS16705 0.46 +0.9 3,458,739 + BWI76_RS16705 0.49 +0.1 3,459,124 + BWI76_RS16705 0.65 +0.5 3,459,688 + BWI76_RS16705 0.88 -0.1 3,459,771 - +0.1 3,459,803 - -0.7 3,459,847 - +0.9 3,460,060 - -0.4 3,460,072 + -1.3 3,460,072 + -0.3 3,460,072 + -0.1 3,460,072 + +0.6 3,460,072 + +0.3 3,460,072 + -0.5 3,460,080 - +0.2 3,460,080 - -0.3 3,460,080 - -0.9 3,460,080 - -0.0 3,460,252 + -1.6 3,460,258 - +0.3 3,460,354 + -1.5 3,460,391 - -0.5 3,460,416 + -0.2 3,460,419 + -0.2 3,460,424 - -0.0 3,460,424 - -0.7 3,460,470 - -0.5 3,460,481 - -0.5 3,460,520 + BWI76_RS16710 0.24 +0.9 3,460,528 - +1.0 3,460,637 - BWI76_RS16710 0.75 -0.6 3,460,647 + BWI76_RS16710 0.80 +0.7 3,460,647 + BWI76_RS16710 0.80 +0.7 3,460,647 + BWI76_RS16710 0.80 -1.8 3,460,647 + BWI76_RS16710 0.80 -1.6 3,460,647 + BWI76_RS16710 0.80 -0.0 3,460,647 + BWI76_RS16710 0.80 +0.0 3,460,647 + BWI76_RS16710 0.80 +1.2 3,460,647 + BWI76_RS16710 0.80 -0.1 3,460,655 - BWI76_RS16710 0.83 -1.1 3,460,655 - BWI76_RS16710 0.83 -0.4 3,460,655 - BWI76_RS16710 0.83 +1.3 3,460,655 - BWI76_RS16710 0.83 -0.1 3,460,655 - BWI76_RS16710 0.83 +0.2 3,460,655 - BWI76_RS16710 0.83 +0.1 3,460,655 - BWI76_RS16710 0.83 -0.4 3,460,655 - BWI76_RS16710 0.83 +1.6 3,460,655 - BWI76_RS16710 0.83 +0.5 3,460,655 - BWI76_RS16710 0.83 +1.2 3,460,655 - BWI76_RS16710 0.83 -0.4 3,460,664 - +0.7 3,460,693 + +0.2 3,460,698 + +0.0 3,460,698 + -0.3 3,460,698 + -0.8 3,460,698 + +0.4 3,460,698 + +0.4 3,460,725 + +0.3 3,460,728 - +0.1 3,460,733 - -0.7 3,460,812 - -0.0 3,460,813 - +0.6 3,460,821 - +0.6 3,460,830 - -1.9 3,460,831 - +0.5 3,460,831 - +1.2 3,460,863 + +1.0 3,460,871 - BWI76_RS16715 0.12 +0.2 3,460,871 - BWI76_RS16715 0.12 +0.1 3,460,871 - BWI76_RS16715 0.12 +0.2 3,460,881 - BWI76_RS16715 0.13 -0.5 3,460,920 + -0.0
Or see this region's nucleotide sequence