Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15150 and BWI76_RS15155 are separated by 13 nucleotides BWI76_RS15155 and BWI76_RS15160 are separated by 72 nucleotides BWI76_RS15160 and BWI76_RS15165 are separated by 240 nucleotides
BWI76_RS15150: BWI76_RS15150 - outer membrane efflux protein, at 3,176,844 to 3,178,091
_RS15150
BWI76_RS15155: BWI76_RS15155 - hypothetical protein, at 3,178,105 to 3,178,473
_RS15155
BWI76_RS15160: BWI76_RS15160 - hypothetical protein, at 3,178,546 to 3,178,965
_RS15160
BWI76_RS15165: BWI76_RS15165 - MBL fold metallo-hydrolase, at 3,179,206 to 3,180,006
_RS15165
Position (kb)
3178
3179 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3177.188 kb on - strand, within BWI76_RS15150 at 3177.270 kb on - strand, within BWI76_RS15150 at 3177.314 kb on - strand, within BWI76_RS15150 at 3177.349 kb on + strand, within BWI76_RS15150 at 3177.979 kb on + strand at 3178.003 kb on + strand at 3178.097 kb on + strand at 3178.135 kb on + strand at 3178.135 kb on + strand at 3178.143 kb on - strand, within BWI76_RS15155 at 3178.205 kb on - strand, within BWI76_RS15155 at 3178.216 kb on + strand, within BWI76_RS15155 at 3178.217 kb on - strand, within BWI76_RS15155 at 3178.217 kb on - strand, within BWI76_RS15155 at 3178.224 kb on - strand, within BWI76_RS15155 at 3178.227 kb on + strand, within BWI76_RS15155 at 3178.232 kb on + strand, within BWI76_RS15155 at 3178.235 kb on - strand, within BWI76_RS15155 at 3178.235 kb on - strand, within BWI76_RS15155 at 3178.245 kb on - strand, within BWI76_RS15155 at 3178.246 kb on + strand, within BWI76_RS15155 at 3178.277 kb on - strand, within BWI76_RS15155 at 3178.378 kb on - strand, within BWI76_RS15155 at 3178.378 kb on - strand, within BWI76_RS15155 at 3178.422 kb on + strand, within BWI76_RS15155 at 3178.429 kb on + strand, within BWI76_RS15155 at 3178.437 kb on - strand at 3178.504 kb on + strand at 3178.514 kb on + strand at 3178.514 kb on + strand at 3178.514 kb on + strand at 3178.519 kb on + strand at 3178.519 kb on + strand at 3178.519 kb on + strand at 3178.522 kb on - strand at 3178.522 kb on - strand at 3178.539 kb on - strand at 3178.574 kb on - strand at 3178.607 kb on - strand, within BWI76_RS15160 at 3178.607 kb on - strand, within BWI76_RS15160 at 3178.609 kb on + strand, within BWI76_RS15160 at 3178.609 kb on + strand, within BWI76_RS15160 at 3178.609 kb on + strand, within BWI76_RS15160 at 3178.617 kb on + strand, within BWI76_RS15160 at 3178.617 kb on - strand, within BWI76_RS15160 at 3178.617 kb on - strand, within BWI76_RS15160 at 3178.617 kb on - strand, within BWI76_RS15160 at 3178.627 kb on + strand, within BWI76_RS15160 at 3178.669 kb on - strand, within BWI76_RS15160 at 3178.684 kb on - strand, within BWI76_RS15160 at 3178.691 kb on - strand, within BWI76_RS15160 at 3178.691 kb on - strand, within BWI76_RS15160 at 3178.694 kb on - strand, within BWI76_RS15160 at 3178.723 kb on - strand, within BWI76_RS15160 at 3178.805 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.863 kb on + strand, within BWI76_RS15160 at 3178.868 kb on + strand at 3178.871 kb on - strand, within BWI76_RS15160 at 3178.871 kb on - strand, within BWI76_RS15160 at 3178.871 kb on - strand, within BWI76_RS15160 at 3178.871 kb on - strand, within BWI76_RS15160 at 3178.871 kb on - strand at 3178.871 kb on - strand, within BWI76_RS15160 at 3178.871 kb on - strand, within BWI76_RS15160 at 3178.876 kb on - strand, within BWI76_RS15160 at 3178.878 kb on + strand, within BWI76_RS15160 at 3178.886 kb on - strand at 3178.894 kb on + strand, within BWI76_RS15160 at 3178.894 kb on + strand, within BWI76_RS15160 at 3178.950 kb on + strand at 3178.969 kb on - strand at 3179.101 kb on + strand at 3179.101 kb on + strand at 3179.109 kb on + strand at 3179.109 kb on - strand at 3179.109 kb on - strand at 3179.126 kb on + strand at 3179.126 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.127 kb on + strand at 3179.134 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.135 kb on - strand at 3179.205 kb on + strand at 3179.264 kb on - strand at 3179.264 kb on - strand at 3179.276 kb on - strand at 3179.276 kb on - strand at 3179.276 kb on - strand at 3179.276 kb on - strand at 3179.284 kb on - strand at 3179.350 kb on + strand, within BWI76_RS15165 at 3179.367 kb on + strand, within BWI76_RS15165 at 3179.375 kb on - strand, within BWI76_RS15165 at 3179.375 kb on - strand, within BWI76_RS15165
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,177,188 - BWI76_RS15150 0.28 +1.1 3,177,270 - BWI76_RS15150 0.34 +0.5 3,177,314 - BWI76_RS15150 0.38 -0.8 3,177,349 + BWI76_RS15150 0.40 +0.3 3,177,979 + -1.1 3,178,003 + -0.1 3,178,097 + +0.7 3,178,135 + -0.4 3,178,135 + +0.1 3,178,143 - BWI76_RS15155 0.10 -0.3 3,178,205 - BWI76_RS15155 0.27 +0.0 3,178,216 + BWI76_RS15155 0.30 +0.1 3,178,217 - BWI76_RS15155 0.30 +2.5 3,178,217 - BWI76_RS15155 0.30 +0.3 3,178,224 - BWI76_RS15155 0.32 -0.5 3,178,227 + BWI76_RS15155 0.33 +1.2 3,178,232 + BWI76_RS15155 0.34 -0.3 3,178,235 - BWI76_RS15155 0.35 -0.7 3,178,235 - BWI76_RS15155 0.35 +0.1 3,178,245 - BWI76_RS15155 0.38 -0.9 3,178,246 + BWI76_RS15155 0.38 -0.9 3,178,277 - BWI76_RS15155 0.47 +0.9 3,178,378 - BWI76_RS15155 0.74 -0.2 3,178,378 - BWI76_RS15155 0.74 +0.3 3,178,422 + BWI76_RS15155 0.86 -1.2 3,178,429 + BWI76_RS15155 0.88 +1.2 3,178,437 - -0.2 3,178,504 + -0.4 3,178,514 + +0.7 3,178,514 + +1.2 3,178,514 + +0.4 3,178,519 + +0.7 3,178,519 + -2.7 3,178,519 + -0.3 3,178,522 - +0.3 3,178,522 - +0.1 3,178,539 - +0.6 3,178,574 - +0.2 3,178,607 - BWI76_RS15160 0.15 -0.8 3,178,607 - BWI76_RS15160 0.15 -0.4 3,178,609 + BWI76_RS15160 0.15 -0.9 3,178,609 + BWI76_RS15160 0.15 +0.6 3,178,609 + BWI76_RS15160 0.15 -0.5 3,178,617 + BWI76_RS15160 0.17 +0.2 3,178,617 - BWI76_RS15160 0.17 +0.5 3,178,617 - BWI76_RS15160 0.17 +0.4 3,178,617 - BWI76_RS15160 0.17 -0.7 3,178,627 + BWI76_RS15160 0.19 +0.5 3,178,669 - BWI76_RS15160 0.29 -0.3 3,178,684 - BWI76_RS15160 0.33 +0.6 3,178,691 - BWI76_RS15160 0.35 -1.0 3,178,691 - BWI76_RS15160 0.35 +0.7 3,178,694 - BWI76_RS15160 0.35 +0.1 3,178,723 - BWI76_RS15160 0.42 -0.5 3,178,805 + BWI76_RS15160 0.62 +0.3 3,178,863 + BWI76_RS15160 0.75 +0.2 3,178,863 + BWI76_RS15160 0.75 -0.4 3,178,863 + BWI76_RS15160 0.75 +0.2 3,178,863 + BWI76_RS15160 0.75 -1.0 3,178,863 + BWI76_RS15160 0.75 -0.9 3,178,863 + BWI76_RS15160 0.75 +0.3 3,178,863 + BWI76_RS15160 0.75 -1.5 3,178,863 + BWI76_RS15160 0.75 +0.5 3,178,868 + +1.0 3,178,871 - BWI76_RS15160 0.77 +1.9 3,178,871 - BWI76_RS15160 0.77 -0.1 3,178,871 - BWI76_RS15160 0.77 +1.0 3,178,871 - BWI76_RS15160 0.77 -2.3 3,178,871 - +1.5 3,178,871 - BWI76_RS15160 0.77 -1.7 3,178,871 - BWI76_RS15160 0.77 -2.1 3,178,876 - BWI76_RS15160 0.79 +0.2 3,178,878 + BWI76_RS15160 0.79 -0.2 3,178,886 - +1.6 3,178,894 + BWI76_RS15160 0.83 +0.5 3,178,894 + BWI76_RS15160 0.83 +0.1 3,178,950 + -1.2 3,178,969 - +1.1 3,179,101 + +0.7 3,179,101 + -0.5 3,179,109 + +0.7 3,179,109 - -0.5 3,179,109 - -0.7 3,179,126 + -1.5 3,179,126 + -0.5 3,179,127 + +1.0 3,179,127 + -1.8 3,179,127 + +0.9 3,179,127 + -0.5 3,179,127 + -1.1 3,179,127 + -0.8 3,179,127 + +1.0 3,179,127 + -0.3 3,179,127 + -0.3 3,179,127 + +1.5 3,179,127 + +0.4 3,179,127 + +0.5 3,179,127 + +0.5 3,179,127 + +0.1 3,179,127 + -0.4 3,179,127 + +0.2 3,179,127 + -0.8 3,179,127 + +0.0 3,179,127 + +0.2 3,179,127 + +2.0 3,179,127 + -0.5 3,179,127 + -1.5 3,179,127 + +1.5 3,179,134 - -1.3 3,179,135 - +0.4 3,179,135 - -0.8 3,179,135 - +0.5 3,179,135 - -1.6 3,179,135 - +0.9 3,179,135 - -1.8 3,179,135 - -0.7 3,179,135 - -0.2 3,179,135 - +0.3 3,179,135 - +0.3 3,179,135 - +2.0 3,179,135 - -0.0 3,179,135 - +0.7 3,179,135 - +0.0 3,179,135 - -0.1 3,179,135 - -1.4 3,179,135 - -1.2 3,179,135 - -0.6 3,179,135 - +0.6 3,179,135 - -1.5 3,179,135 - -1.0 3,179,135 - -1.0 3,179,135 - +0.2 3,179,135 - -0.5 3,179,135 - +0.2 3,179,135 - -0.0 3,179,205 + +0.5 3,179,264 - +0.6 3,179,264 - -0.0 3,179,276 - +0.0 3,179,276 - +2.0 3,179,276 - +0.4 3,179,276 - -0.2 3,179,284 - -1.1 3,179,350 + BWI76_RS15165 0.18 +1.5 3,179,367 + BWI76_RS15165 0.20 -0.6 3,179,375 - BWI76_RS15165 0.21 -1.4 3,179,375 - BWI76_RS15165 0.21 +0.1
Or see this region's nucleotide sequence