Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05386 and H281DRAFT_05387 are separated by 376 nucleotides H281DRAFT_05387 and H281DRAFT_05388 are separated by 92 nucleotides
H281DRAFT_05386: H281DRAFT_05386 - Glucose/arabinose dehydrogenase, beta-propeller fold, at 146,160 to 147,557
_05386
H281DRAFT_05387: H281DRAFT_05387 - Pimeloyl-ACP methyl ester carboxylesterase, at 147,934 to 148,830
_05387
H281DRAFT_05388: H281DRAFT_05388 - ribonucleoside-diphosphate reductase class II, at 148,923 to 151,508
_05388
Position (kb) 147
148
149 Strain fitness (log2 ratio) -1
0
1 at 146.969 kb on + strand, within H281DRAFT_05386 at 147.119 kb on - strand, within H281DRAFT_05386 at 147.127 kb on + strand, within H281DRAFT_05386 at 147.153 kb on + strand, within H281DRAFT_05386 at 147.153 kb on + strand, within H281DRAFT_05386 at 147.154 kb on - strand, within H281DRAFT_05386 at 147.154 kb on - strand, within H281DRAFT_05386 at 147.154 kb on - strand, within H281DRAFT_05386 at 147.339 kb on + strand, within H281DRAFT_05386 at 147.407 kb on + strand, within H281DRAFT_05386 at 147.419 kb on + strand at 147.419 kb on + strand at 147.486 kb on + strand at 147.486 kb on + strand at 147.487 kb on - strand at 147.487 kb on - strand at 147.637 kb on - strand at 147.798 kb on - strand at 147.994 kb on + strand at 147.994 kb on + strand at 148.113 kb on + strand, within H281DRAFT_05387 at 148.298 kb on + strand, within H281DRAFT_05387 at 148.315 kb on + strand, within H281DRAFT_05387 at 148.391 kb on - strand, within H281DRAFT_05387 at 148.515 kb on + strand, within H281DRAFT_05387 at 148.678 kb on - strand, within H281DRAFT_05387 at 148.764 kb on + strand at 148.765 kb on - strand at 148.765 kb on - strand at 148.826 kb on + strand at 148.895 kb on + strand at 149.027 kb on + strand at 149.028 kb on - strand at 149.028 kb on - strand at 149.028 kb on - strand at 149.028 kb on - strand at 149.528 kb on - strand, within H281DRAFT_05388 at 149.530 kb on - strand, within H281DRAFT_05388 at 149.557 kb on + strand, within H281DRAFT_05388 at 149.558 kb on - strand, within H281DRAFT_05388 at 149.750 kb on - strand, within H281DRAFT_05388 at 149.821 kb on + strand, within H281DRAFT_05388 at 149.822 kb on - strand, within H281DRAFT_05388 at 149.822 kb on - strand, within H281DRAFT_05388 at 149.822 kb on - strand, within H281DRAFT_05388
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 146,969 + H281DRAFT_05386 0.58 -0.2 147,119 - H281DRAFT_05386 0.69 -0.2 147,127 + H281DRAFT_05386 0.69 +0.0 147,153 + H281DRAFT_05386 0.71 -0.9 147,153 + H281DRAFT_05386 0.71 -0.1 147,154 - H281DRAFT_05386 0.71 +0.3 147,154 - H281DRAFT_05386 0.71 +0.3 147,154 - H281DRAFT_05386 0.71 +0.7 147,339 + H281DRAFT_05386 0.84 +0.9 147,407 + H281DRAFT_05386 0.89 -0.1 147,419 + +0.5 147,419 + -0.6 147,486 + -0.5 147,486 + +1.0 147,487 - +0.3 147,487 - +0.2 147,637 - +0.6 147,798 - +0.3 147,994 + -1.2 147,994 + +0.3 148,113 + H281DRAFT_05387 0.20 +0.8 148,298 + H281DRAFT_05387 0.41 +1.0 148,315 + H281DRAFT_05387 0.42 +0.4 148,391 - H281DRAFT_05387 0.51 +1.5 148,515 + H281DRAFT_05387 0.65 +0.2 148,678 - H281DRAFT_05387 0.83 +0.2 148,764 + -0.4 148,765 - -0.4 148,765 - +0.3 148,826 + +0.4 148,895 + +0.3 149,027 + +0.2 149,028 - +0.9 149,028 - -0.1 149,028 - +0.9 149,028 - -0.3 149,528 - H281DRAFT_05388 0.23 +0.1 149,530 - H281DRAFT_05388 0.23 -0.1 149,557 + H281DRAFT_05388 0.25 +0.1 149,558 - H281DRAFT_05388 0.25 +0.0 149,750 - H281DRAFT_05388 0.32 +0.2 149,821 + H281DRAFT_05388 0.35 +0.3 149,822 - H281DRAFT_05388 0.35 -0.6 149,822 - H281DRAFT_05388 0.35 +0.1 149,822 - H281DRAFT_05388 0.35 +0.8
Or see this region's nucleotide sequence