Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05259 and H281DRAFT_05260 are separated by 196 nucleotides H281DRAFT_05260 and H281DRAFT_05261 are separated by 139 nucleotides H281DRAFT_05261 and H281DRAFT_05262 are separated by 152 nucleotides
H281DRAFT_05259: H281DRAFT_05259 - transcriptional regulator, LysR family, at 351 to 1,346
_05259
H281DRAFT_05260: H281DRAFT_05260 - Uncharacterized membrane protein YccC, at 1,543 to 3,708
_05260
H281DRAFT_05261: H281DRAFT_05261 - hypothetical protein, at 3,848 to 4,060
_05261
H281DRAFT_05262: H281DRAFT_05262 - succinyl-CoA:acetate CoA-transferase, at 4,213 to 5,727
_05262
Position (kb) 1
2
3
4 Strain fitness (log2 ratio) -1
0
1
2
3 at 0.562 kb on + strand, within H281DRAFT_05259 at 0.639 kb on + strand, within H281DRAFT_05259 at 0.677 kb on + strand, within H281DRAFT_05259 at 0.765 kb on - strand, within H281DRAFT_05259 at 0.833 kb on - strand, within H281DRAFT_05259 at 0.852 kb on + strand, within H281DRAFT_05259 at 0.853 kb on - strand, within H281DRAFT_05259 at 0.866 kb on + strand, within H281DRAFT_05259 at 0.966 kb on + strand, within H281DRAFT_05259 at 1.030 kb on + strand, within H281DRAFT_05259 at 1.030 kb on + strand, within H281DRAFT_05259 at 1.030 kb on + strand, within H281DRAFT_05259 at 1.031 kb on - strand, within H281DRAFT_05259 at 1.031 kb on - strand, within H281DRAFT_05259 at 1.056 kb on - strand, within H281DRAFT_05259 at 1.061 kb on + strand, within H281DRAFT_05259 at 1.132 kb on - strand, within H281DRAFT_05259 at 1.153 kb on + strand, within H281DRAFT_05259 at 1.169 kb on + strand, within H281DRAFT_05259 at 1.211 kb on + strand, within H281DRAFT_05259 at 1.212 kb on - strand, within H281DRAFT_05259 at 1.290 kb on - strand at 1.335 kb on + strand at 1.335 kb on + strand at 1.340 kb on + strand at 1.375 kb on + strand at 1.375 kb on + strand at 1.376 kb on - strand at 1.464 kb on + strand at 1.667 kb on + strand at 1.667 kb on + strand at 1.667 kb on + strand at 2.126 kb on + strand, within H281DRAFT_05260 at 2.507 kb on + strand, within H281DRAFT_05260 at 2.550 kb on - strand, within H281DRAFT_05260 at 2.550 kb on - strand, within H281DRAFT_05260 at 2.616 kb on - strand, within H281DRAFT_05260 at 2.645 kb on - strand, within H281DRAFT_05260 at 2.656 kb on + strand, within H281DRAFT_05260 at 2.657 kb on - strand, within H281DRAFT_05260 at 2.710 kb on + strand, within H281DRAFT_05260 at 2.947 kb on + strand, within H281DRAFT_05260 at 2.947 kb on + strand, within H281DRAFT_05260 at 2.947 kb on + strand, within H281DRAFT_05260 at 3.443 kb on - strand, within H281DRAFT_05260 at 3.716 kb on - strand at 3.802 kb on + strand at 3.803 kb on - strand at 3.803 kb on - strand at 4.047 kb on - strand at 4.058 kb on + strand at 4.061 kb on + strand at 4.062 kb on - strand at 4.252 kb on - strand at 4.288 kb on - strand at 4.288 kb on - strand at 4.641 kb on - strand, within H281DRAFT_05262
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 562 + H281DRAFT_05259 0.21 +1.9 639 + H281DRAFT_05259 0.29 +1.9 677 + H281DRAFT_05259 0.33 +1.8 765 - H281DRAFT_05259 0.42 +2.9 833 - H281DRAFT_05259 0.48 +2.0 852 + H281DRAFT_05259 0.50 +1.9 853 - H281DRAFT_05259 0.50 +2.3 866 + H281DRAFT_05259 0.52 +2.2 966 + H281DRAFT_05259 0.62 +1.9 1,030 + H281DRAFT_05259 0.68 +2.0 1,030 + H281DRAFT_05259 0.68 +1.9 1,030 + H281DRAFT_05259 0.68 +1.4 1,031 - H281DRAFT_05259 0.68 +1.9 1,031 - H281DRAFT_05259 0.68 +1.9 1,056 - H281DRAFT_05259 0.71 +2.3 1,061 + H281DRAFT_05259 0.71 +1.8 1,132 - H281DRAFT_05259 0.78 +2.0 1,153 + H281DRAFT_05259 0.81 +2.1 1,169 + H281DRAFT_05259 0.82 +2.9 1,211 + H281DRAFT_05259 0.86 +1.5 1,212 - H281DRAFT_05259 0.86 +2.2 1,290 - +2.5 1,335 + +1.8 1,335 + +2.6 1,340 + +2.4 1,375 + +1.4 1,375 + +1.4 1,376 - -0.5 1,464 + +1.0 1,667 + +0.7 1,667 + +0.7 1,667 + +0.2 2,126 + H281DRAFT_05260 0.27 +0.6 2,507 + H281DRAFT_05260 0.45 +0.9 2,550 - H281DRAFT_05260 0.46 +0.9 2,550 - H281DRAFT_05260 0.46 +0.5 2,616 - H281DRAFT_05260 0.50 +0.5 2,645 - H281DRAFT_05260 0.51 +1.1 2,656 + H281DRAFT_05260 0.51 +0.1 2,657 - H281DRAFT_05260 0.51 +0.2 2,710 + H281DRAFT_05260 0.54 +1.7 2,947 + H281DRAFT_05260 0.65 +0.3 2,947 + H281DRAFT_05260 0.65 +0.8 2,947 + H281DRAFT_05260 0.65 -0.1 3,443 - H281DRAFT_05260 0.88 +1.0 3,716 - +1.6 3,802 + -0.1 3,803 - -0.0 3,803 - -0.2 4,047 - +0.1 4,058 + -0.7 4,061 + -0.2 4,062 - +1.8 4,252 - +0.2 4,288 - -0.3 4,288 - -0.3 4,641 - H281DRAFT_05262 0.28 +0.3
Or see this region's nucleotide sequence