Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05046 and H281DRAFT_05047 are separated by 409 nucleotides H281DRAFT_05047 and H281DRAFT_05048 are separated by 68 nucleotides
H281DRAFT_05046: H281DRAFT_05046 - Signal transduction histidine kinase, at 234,423 to 235,511
_05046
H281DRAFT_05047: H281DRAFT_05047 - thioredoxin reductase (NADPH), at 235,921 to 237,612
_05047
H281DRAFT_05048: H281DRAFT_05048 - Tripartite tricarboxylate transporter TctA family protein, at 237,681 to 239,060
_05048
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -1
0
1 at 235.213 kb on + strand, within H281DRAFT_05046 at 235.678 kb on + strand at 235.713 kb on + strand at 235.717 kb on + strand at 235.741 kb on + strand at 235.741 kb on + strand at 235.742 kb on - strand at 236.464 kb on + strand at 236.645 kb on - strand, within H281DRAFT_05047 at 236.694 kb on - strand at 236.782 kb on + strand, within H281DRAFT_05047 at 236.783 kb on - strand, within H281DRAFT_05047 at 236.848 kb on - strand, within H281DRAFT_05047 at 237.032 kb on - strand, within H281DRAFT_05047 at 237.122 kb on + strand, within H281DRAFT_05047 at 237.153 kb on + strand, within H281DRAFT_05047 at 237.153 kb on + strand, within H281DRAFT_05047 at 237.153 kb on + strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.229 kb on - strand, within H281DRAFT_05047 at 237.229 kb on - strand, within H281DRAFT_05047 at 237.725 kb on - strand at 237.728 kb on - strand at 237.925 kb on + strand, within H281DRAFT_05048 at 237.926 kb on - strand, within H281DRAFT_05048 at 238.154 kb on - strand, within H281DRAFT_05048 at 238.154 kb on - strand, within H281DRAFT_05048 at 238.154 kb on - strand, within H281DRAFT_05048 at 238.207 kb on + strand, within H281DRAFT_05048 at 238.207 kb on + strand, within H281DRAFT_05048 at 238.208 kb on - strand, within H281DRAFT_05048 at 238.312 kb on + strand at 238.492 kb on + strand, within H281DRAFT_05048 at 238.569 kb on + strand, within H281DRAFT_05048
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 235,213 + H281DRAFT_05046 0.73 +0.1 235,678 + +0.1 235,713 + +0.2 235,717 + +0.1 235,741 + +0.8 235,741 + +1.1 235,742 - -0.9 236,464 + -0.2 236,645 - H281DRAFT_05047 0.43 -0.5 236,694 - +0.4 236,782 + H281DRAFT_05047 0.51 -0.1 236,783 - H281DRAFT_05047 0.51 +0.1 236,848 - H281DRAFT_05047 0.55 -0.3 237,032 - H281DRAFT_05047 0.66 +0.3 237,122 + H281DRAFT_05047 0.71 -0.3 237,153 + H281DRAFT_05047 0.73 +0.1 237,153 + H281DRAFT_05047 0.73 +0.4 237,153 + H281DRAFT_05047 0.73 +0.0 237,154 - H281DRAFT_05047 0.73 +1.5 237,154 - H281DRAFT_05047 0.73 +0.1 237,154 - H281DRAFT_05047 0.73 +0.1 237,154 - H281DRAFT_05047 0.73 -1.1 237,229 - H281DRAFT_05047 0.77 +0.1 237,229 - H281DRAFT_05047 0.77 -1.5 237,725 - +0.7 237,728 - -0.5 237,925 + H281DRAFT_05048 0.18 -0.3 237,926 - H281DRAFT_05048 0.18 -0.2 238,154 - H281DRAFT_05048 0.34 +0.6 238,154 - H281DRAFT_05048 0.34 +0.0 238,154 - H281DRAFT_05048 0.34 +0.3 238,207 + H281DRAFT_05048 0.38 +0.4 238,207 + H281DRAFT_05048 0.38 +1.1 238,208 - H281DRAFT_05048 0.38 +0.1 238,312 + -0.1 238,492 + H281DRAFT_05048 0.59 +1.1 238,569 + H281DRAFT_05048 0.64 +0.5
Or see this region's nucleotide sequence