Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04775 and H281DRAFT_04776 are separated by 98 nucleotides H281DRAFT_04776 and H281DRAFT_04777 are separated by 5 nucleotides H281DRAFT_04777 and H281DRAFT_04778 are separated by 25 nucleotides
H281DRAFT_04775: H281DRAFT_04775 - tyrosine-protein kinase Etk/Wzc, at 195,193 to 197,427
_04775
H281DRAFT_04776: H281DRAFT_04776 - GDPmannose 4,6-dehydratase, at 197,526 to 198,644
_04776
H281DRAFT_04777: H281DRAFT_04777 - GDP-L-fucose synthase, at 198,650 to 199,606
_04777
H281DRAFT_04778: H281DRAFT_04778 - Glycosyltransferase involved in cell wall bisynthesis, at 199,632 to 200,774
_04778
Position (kb) 197
198
199 Strain fitness (log2 ratio) -1
0
1 at 196.777 kb on - strand, within H281DRAFT_04775 at 197.019 kb on - strand, within H281DRAFT_04775 at 197.313 kb on + strand at 197.340 kb on - strand at 197.938 kb on - strand, within H281DRAFT_04776 at 198.061 kb on - strand, within H281DRAFT_04776 at 198.177 kb on + strand, within H281DRAFT_04776 at 198.736 kb on + strand at 198.737 kb on - strand at 198.737 kb on - strand at 198.894 kb on - strand, within H281DRAFT_04777 at 198.984 kb on - strand, within H281DRAFT_04777 at 199.112 kb on + strand, within H281DRAFT_04777 at 199.169 kb on + strand, within H281DRAFT_04777 at 199.574 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 196,777 - H281DRAFT_04775 0.71 +1.2 197,019 - H281DRAFT_04775 0.82 +0.1 197,313 + +0.5 197,340 - +0.3 197,938 - H281DRAFT_04776 0.37 +0.6 198,061 - H281DRAFT_04776 0.48 +0.6 198,177 + H281DRAFT_04776 0.58 +0.5 198,736 + +0.0 198,737 - -0.4 198,737 - -0.5 198,894 - H281DRAFT_04777 0.25 -0.3 198,984 - H281DRAFT_04777 0.35 -0.4 199,112 + H281DRAFT_04777 0.48 +0.3 199,169 + H281DRAFT_04777 0.54 +1.1 199,574 - +0.3
Or see this region's nucleotide sequence