Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03835 and H281DRAFT_03836 overlap by 4 nucleotides H281DRAFT_03836 and H281DRAFT_03837 are separated by 12 nucleotides H281DRAFT_03837 and H281DRAFT_03838 are separated by 14 nucleotides H281DRAFT_03838 and H281DRAFT_03839 overlap by 10 nucleotides H281DRAFT_03839 and H281DRAFT_03840 are separated by 77 nucleotides
H281DRAFT_03835: H281DRAFT_03835 - NitT/TauT family transport system permease protein, at 362,184 to 362,999
_03835
H281DRAFT_03836: H281DRAFT_03836 - NitT/TauT family transport system ATP-binding protein, at 362,996 to 363,787
_03836
H281DRAFT_03837: H281DRAFT_03837 - hypothetical protein, at 363,800 to 364,504
_03837
H281DRAFT_03838: H281DRAFT_03838 - hypothetical protein, at 364,519 to 365,160
_03838
H281DRAFT_03839: H281DRAFT_03839 - hypothetical protein, at 365,151 to 365,255
_03839
H281DRAFT_03840: H281DRAFT_03840 - urea carboxylase, at 365,333 to 368,932
_03840
Position (kb) 363
364
365 Strain fitness (log2 ratio) -1
0
1 at 362.878 kb on + strand, within H281DRAFT_03835 at 362.879 kb on - strand, within H281DRAFT_03835 at 362.902 kb on - strand, within H281DRAFT_03835 at 363.574 kb on + strand, within H281DRAFT_03836 at 363.683 kb on - strand, within H281DRAFT_03836 at 364.011 kb on - strand, within H281DRAFT_03837 at 364.304 kb on + strand, within H281DRAFT_03837 at 364.304 kb on + strand, within H281DRAFT_03837 at 364.317 kb on - strand, within H281DRAFT_03837 at 364.525 kb on - strand at 364.676 kb on - strand at 364.765 kb on + strand, within H281DRAFT_03838 at 365.044 kb on + strand, within H281DRAFT_03838 at 365.045 kb on - strand, within H281DRAFT_03838 at 365.045 kb on - strand, within H281DRAFT_03838 at 365.045 kb on - strand at 365.151 kb on - strand at 365.178 kb on - strand, within H281DRAFT_03839 at 365.181 kb on + strand, within H281DRAFT_03839
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 362,878 + H281DRAFT_03835 0.85 +0.0 362,879 - H281DRAFT_03835 0.85 +0.8 362,902 - H281DRAFT_03835 0.88 -0.2 363,574 + H281DRAFT_03836 0.73 -0.2 363,683 - H281DRAFT_03836 0.87 +0.2 364,011 - H281DRAFT_03837 0.30 +1.0 364,304 + H281DRAFT_03837 0.71 +0.8 364,304 + H281DRAFT_03837 0.71 -0.8 364,317 - H281DRAFT_03837 0.73 +0.3 364,525 - -0.3 364,676 - -0.2 364,765 + H281DRAFT_03838 0.38 -0.4 365,044 + H281DRAFT_03838 0.82 +1.2 365,045 - H281DRAFT_03838 0.82 +0.2 365,045 - H281DRAFT_03838 0.82 +0.2 365,045 - +0.7 365,151 - -0.2 365,178 - H281DRAFT_03839 0.26 -0.8 365,181 + H281DRAFT_03839 0.29 +0.4
Or see this region's nucleotide sequence