Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02834 and H281DRAFT_02835 are separated by 3 nucleotides H281DRAFT_02835 and H281DRAFT_02836 are separated by 173 nucleotides
H281DRAFT_02834: H281DRAFT_02834 - Choline dehydrogenase, at 425,723 to 427,345
_02834
H281DRAFT_02835: H281DRAFT_02835 - Membrane bound FAD containing D-sorbitol dehydrogenase, at 427,349 to 427,798
_02835
H281DRAFT_02836: H281DRAFT_02836 - Outer membrane protein (porin), at 427,972 to 429,078
_02836
Position (kb) 427
428 Strain fitness (log2 ratio) -1
0
1
2
3 at 426.360 kb on + strand, within H281DRAFT_02834 at 426.405 kb on - strand, within H281DRAFT_02834 at 426.405 kb on - strand, within H281DRAFT_02834 at 426.591 kb on + strand, within H281DRAFT_02834 at 426.591 kb on + strand, within H281DRAFT_02834 at 426.661 kb on - strand, within H281DRAFT_02834 at 426.727 kb on - strand, within H281DRAFT_02834 at 426.768 kb on + strand at 426.817 kb on - strand, within H281DRAFT_02834 at 426.919 kb on - strand, within H281DRAFT_02834 at 426.919 kb on - strand, within H281DRAFT_02834 at 426.922 kb on - strand, within H281DRAFT_02834 at 426.940 kb on - strand, within H281DRAFT_02834 at 427.057 kb on - strand, within H281DRAFT_02834 at 427.057 kb on - strand, within H281DRAFT_02834 at 427.113 kb on + strand, within H281DRAFT_02834 at 427.350 kb on + strand at 427.351 kb on - strand at 427.405 kb on - strand, within H281DRAFT_02835 at 427.458 kb on + strand, within H281DRAFT_02835 at 427.459 kb on - strand, within H281DRAFT_02835 at 427.463 kb on - strand, within H281DRAFT_02835 at 427.463 kb on - strand, within H281DRAFT_02835 at 427.928 kb on - strand at 427.998 kb on - strand at 427.998 kb on - strand at 428.141 kb on + strand, within H281DRAFT_02836 at 428.159 kb on + strand, within H281DRAFT_02836 at 428.160 kb on - strand, within H281DRAFT_02836 at 428.160 kb on - strand, within H281DRAFT_02836 at 428.160 kb on - strand, within H281DRAFT_02836 at 428.160 kb on - strand, within H281DRAFT_02836 at 428.222 kb on + strand, within H281DRAFT_02836 at 428.222 kb on + strand, within H281DRAFT_02836 at 428.223 kb on - strand, within H281DRAFT_02836 at 428.264 kb on + strand, within H281DRAFT_02836 at 428.451 kb on - strand, within H281DRAFT_02836 at 428.607 kb on - strand, within H281DRAFT_02836 at 428.616 kb on + strand, within H281DRAFT_02836
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 426,360 + H281DRAFT_02834 0.39 +0.6 426,405 - H281DRAFT_02834 0.42 +0.4 426,405 - H281DRAFT_02834 0.42 -0.1 426,591 + H281DRAFT_02834 0.53 +0.3 426,591 + H281DRAFT_02834 0.53 -0.1 426,661 - H281DRAFT_02834 0.58 +0.5 426,727 - H281DRAFT_02834 0.62 +3.1 426,768 + -0.8 426,817 - H281DRAFT_02834 0.67 +0.1 426,919 - H281DRAFT_02834 0.74 +0.2 426,919 - H281DRAFT_02834 0.74 +0.1 426,922 - H281DRAFT_02834 0.74 +1.3 426,940 - H281DRAFT_02834 0.75 +0.2 427,057 - H281DRAFT_02834 0.82 -0.5 427,057 - H281DRAFT_02834 0.82 +0.4 427,113 + H281DRAFT_02834 0.86 -1.4 427,350 + +1.4 427,351 - -0.1 427,405 - H281DRAFT_02835 0.12 +0.9 427,458 + H281DRAFT_02835 0.24 +0.9 427,459 - H281DRAFT_02835 0.24 +0.0 427,463 - H281DRAFT_02835 0.25 +0.7 427,463 - H281DRAFT_02835 0.25 +0.1 427,928 - +0.3 427,998 - -1.0 427,998 - -0.2 428,141 + H281DRAFT_02836 0.15 -0.1 428,159 + H281DRAFT_02836 0.17 +0.1 428,160 - H281DRAFT_02836 0.17 +0.7 428,160 - H281DRAFT_02836 0.17 +0.2 428,160 - H281DRAFT_02836 0.17 -0.3 428,160 - H281DRAFT_02836 0.17 +0.5 428,222 + H281DRAFT_02836 0.23 -0.2 428,222 + H281DRAFT_02836 0.23 -0.6 428,223 - H281DRAFT_02836 0.23 -0.3 428,264 + H281DRAFT_02836 0.26 +0.4 428,451 - H281DRAFT_02836 0.43 +0.3 428,607 - H281DRAFT_02836 0.57 +0.1 428,616 + H281DRAFT_02836 0.58 -0.3
Or see this region's nucleotide sequence