Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02547 and H281DRAFT_02548 are separated by 72 nucleotides H281DRAFT_02548 and H281DRAFT_02549 are separated by 35 nucleotides H281DRAFT_02549 and H281DRAFT_02550 are separated by 389 nucleotides H281DRAFT_02550 and H281DRAFT_02551 are separated by 105 nucleotides
H281DRAFT_02547: H281DRAFT_02547 - Nucleoside-diphosphate-sugar epimerase, at 121,712 to 122,605
_02547
H281DRAFT_02548: H281DRAFT_02548 - Uncharacterized membrane protein YoaK, UPF0700 family, at 122,678 to 123,406
_02548
H281DRAFT_02549: H281DRAFT_02549 - putative oxidoreductase, at 123,442 to 123,849
_02549
H281DRAFT_02550: H281DRAFT_02550 - Uncharacterized protein, DUF1810 family, at 124,239 to 124,667
_02550
H281DRAFT_02551: H281DRAFT_02551 - hypothetical protein, at 124,773 to 125,072
_02551
Position (kb) 123
124 Strain fitness (log2 ratio) -1
0
1 at 122.592 kb on - strand at 122.626 kb on - strand at 122.715 kb on - strand at 122.715 kb on - strand at 122.720 kb on + strand at 122.721 kb on - strand at 123.099 kb on + strand, within H281DRAFT_02548 at 123.148 kb on - strand, within H281DRAFT_02548 at 123.148 kb on - strand, within H281DRAFT_02548 at 123.706 kb on - strand, within H281DRAFT_02549 at 123.972 kb on + strand at 124.131 kb on - strand at 124.131 kb on - strand at 124.131 kb on - strand at 124.238 kb on + strand at 124.291 kb on - strand, within H281DRAFT_02550 at 124.772 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 122,592 - +0.0 122,626 - -0.0 122,715 - +0.2 122,715 - -0.2 122,720 + -0.7 122,721 - -0.5 123,099 + H281DRAFT_02548 0.58 +0.8 123,148 - H281DRAFT_02548 0.64 +0.4 123,148 - H281DRAFT_02548 0.64 -1.5 123,706 - H281DRAFT_02549 0.65 +0.6 123,972 + +0.3 124,131 - +0.1 124,131 - -0.4 124,131 - +0.3 124,238 + +0.2 124,291 - H281DRAFT_02550 0.12 -0.2 124,772 - -0.5
Or see this region's nucleotide sequence