Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01794 and H281DRAFT_01795 are separated by 81 nucleotides H281DRAFT_01795 and H281DRAFT_01796 are separated by 42 nucleotides H281DRAFT_01796 and H281DRAFT_01797 are separated by 33 nucleotides
H281DRAFT_01794: H281DRAFT_01794 - transcriptional regulator, LysR family, at 695,808 to 696,818
_01794
H281DRAFT_01795: H281DRAFT_01795 - Protein N-acetyltransferase, RimJ/RimL family, at 696,900 to 697,406
_01795
H281DRAFT_01796: H281DRAFT_01796 - Plastocyanin, at 697,449 to 697,793
_01796
H281DRAFT_01797: H281DRAFT_01797 - 3',5'-cyclic AMP phosphodiesterase CpdA, at 697,827 to 698,774
_01797
Position (kb) 696
697
698 Strain fitness (log2 ratio) -1
0
1 at 696.626 kb on - strand, within H281DRAFT_01794 at 696.913 kb on + strand at 697.149 kb on + strand, within H281DRAFT_01795 at 697.150 kb on - strand, within H281DRAFT_01795 at 697.224 kb on - strand, within H281DRAFT_01795 at 697.224 kb on - strand, within H281DRAFT_01795 at 697.224 kb on - strand, within H281DRAFT_01795 at 697.304 kb on + strand, within H281DRAFT_01795 at 697.305 kb on - strand, within H281DRAFT_01795 at 697.305 kb on - strand, within H281DRAFT_01795 at 697.378 kb on + strand at 697.437 kb on - strand at 697.503 kb on - strand, within H281DRAFT_01796 at 698.306 kb on - strand, within H281DRAFT_01797
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 696,626 - H281DRAFT_01794 0.81 -0.3 696,913 + +0.4 697,149 + H281DRAFT_01795 0.49 +0.0 697,150 - H281DRAFT_01795 0.49 +0.2 697,224 - H281DRAFT_01795 0.64 +0.2 697,224 - H281DRAFT_01795 0.64 +0.8 697,224 - H281DRAFT_01795 0.64 +0.8 697,304 + H281DRAFT_01795 0.80 +1.1 697,305 - H281DRAFT_01795 0.80 +0.7 697,305 - H281DRAFT_01795 0.80 +0.0 697,378 + -0.5 697,437 - +0.7 697,503 - H281DRAFT_01796 0.16 -0.1 698,306 - H281DRAFT_01797 0.51 -0.7
Or see this region's nucleotide sequence