Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01235 and H281DRAFT_01236 are separated by 28 nucleotides H281DRAFT_01236 and H281DRAFT_01237 are separated by 148 nucleotides H281DRAFT_01237 and H281DRAFT_01238 are separated by 457 nucleotides
H281DRAFT_01235: H281DRAFT_01235 - DNA-binding protein H-NS, at 72,981 to 73,307
_01235
H281DRAFT_01236: H281DRAFT_01236 - Protein-tyrosine-phosphatase, at 73,336 to 73,845
_01236
H281DRAFT_01237: H281DRAFT_01237 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 73,994 to 74,674
_01237
H281DRAFT_01238: H281DRAFT_01238 - FMN reductase, at 75,132 to 75,791
_01238
Position (kb) 73
74
75 Strain fitness (log2 ratio) -1
0
1
2 at 73.002 kb on - strand at 73.002 kb on - strand at 73.072 kb on + strand, within H281DRAFT_01235 at 73.072 kb on + strand, within H281DRAFT_01235 at 73.072 kb on + strand at 73.073 kb on - strand, within H281DRAFT_01235 at 73.073 kb on - strand, within H281DRAFT_01235 at 73.330 kb on + strand at 73.330 kb on + strand at 73.330 kb on + strand at 73.331 kb on - strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.333 kb on - strand at 73.435 kb on + strand, within H281DRAFT_01236 at 73.436 kb on - strand, within H281DRAFT_01236 at 73.436 kb on - strand, within H281DRAFT_01236 at 73.498 kb on - strand, within H281DRAFT_01236 at 73.654 kb on + strand, within H281DRAFT_01236 at 73.655 kb on - strand, within H281DRAFT_01236 at 73.655 kb on - strand, within H281DRAFT_01236 at 73.876 kb on + strand at 73.876 kb on + strand at 73.877 kb on - strand at 73.877 kb on - strand at 73.918 kb on + strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.991 kb on + strand at 73.992 kb on - strand at 73.992 kb on - strand at 74.131 kb on + strand, within H281DRAFT_01237 at 74.198 kb on - strand, within H281DRAFT_01237 at 74.661 kb on + strand at 74.858 kb on - strand at 74.902 kb on + strand at 74.993 kb on + strand at 74.994 kb on - strand at 75.001 kb on + strand at 75.040 kb on + strand at 75.040 kb on + strand at 75.041 kb on - strand at 75.287 kb on + strand, within H281DRAFT_01238 at 75.449 kb on - strand, within H281DRAFT_01238 at 75.468 kb on + strand, within H281DRAFT_01238 at 75.469 kb on - strand, within H281DRAFT_01238 at 75.508 kb on - strand, within H281DRAFT_01238
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 73,002 - -1.0 73,002 - -0.7 73,072 + H281DRAFT_01235 0.28 +0.7 73,072 + H281DRAFT_01235 0.28 -0.0 73,072 + -1.3 73,073 - H281DRAFT_01235 0.28 -0.7 73,073 - H281DRAFT_01235 0.28 -0.5 73,330 + +0.1 73,330 + +0.5 73,330 + +0.3 73,331 - +0.3 73,332 + -1.2 73,332 + +0.7 73,332 + -0.3 73,332 + +1.6 73,333 - -1.4 73,435 + H281DRAFT_01236 0.19 +0.1 73,436 - H281DRAFT_01236 0.20 +0.1 73,436 - H281DRAFT_01236 0.20 +0.8 73,498 - H281DRAFT_01236 0.32 -1.3 73,654 + H281DRAFT_01236 0.62 +2.0 73,655 - H281DRAFT_01236 0.63 +0.8 73,655 - H281DRAFT_01236 0.63 +0.0 73,876 + +0.4 73,876 + -1.1 73,877 - +1.9 73,877 - +1.1 73,918 + +0.7 73,919 - +0.3 73,919 - +0.3 73,919 - +0.6 73,919 - +0.7 73,991 + +0.3 73,992 - -0.0 73,992 - +0.9 74,131 + H281DRAFT_01237 0.20 -0.1 74,198 - H281DRAFT_01237 0.30 +1.3 74,661 + +0.2 74,858 - -0.5 74,902 + +1.3 74,993 + -0.0 74,994 - +0.3 75,001 + +0.9 75,040 + +0.6 75,040 + -0.1 75,041 - +0.9 75,287 + H281DRAFT_01238 0.23 -0.2 75,449 - H281DRAFT_01238 0.48 -0.6 75,468 + H281DRAFT_01238 0.51 +0.2 75,469 - H281DRAFT_01238 0.51 +0.6 75,508 - H281DRAFT_01238 0.57 +0.2
Or see this region's nucleotide sequence