Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01180 and H281DRAFT_01181 are separated by 62 nucleotides H281DRAFT_01181 and H281DRAFT_01182 are separated by 60 nucleotides H281DRAFT_01182 and H281DRAFT_01183 are separated by 11 nucleotides
H281DRAFT_01180: H281DRAFT_01180 - acyl-CoA dehydrogenase, at 14,381 to 16,669
_01180
H281DRAFT_01181: H281DRAFT_01181 - Acyl-CoA synthetase (NDP forming), at 16,732 to 18,816
_01181
H281DRAFT_01182: H281DRAFT_01182 - SnoaL-like domain-containing protein, at 18,877 to 19,449
_01182
H281DRAFT_01183: H281DRAFT_01183 - Sugar lactone lactonase YvrE, at 19,461 to 20,342
_01183
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -1
0
1
2 at 15.895 kb on + strand, within H281DRAFT_01180 at 15.951 kb on - strand, within H281DRAFT_01180 at 16.395 kb on - strand, within H281DRAFT_01180 at 16.562 kb on - strand at 16.750 kb on - strand at 17.347 kb on + strand, within H281DRAFT_01181 at 17.727 kb on + strand, within H281DRAFT_01181 at 17.728 kb on - strand, within H281DRAFT_01181 at 17.808 kb on + strand, within H281DRAFT_01181 at 17.821 kb on - strand, within H281DRAFT_01181 at 18.128 kb on - strand, within H281DRAFT_01181 at 18.669 kb on + strand at 18.740 kb on + strand at 18.741 kb on - strand at 18.792 kb on - strand at 18.876 kb on + strand at 18.876 kb on + strand at 18.877 kb on - strand at 19.163 kb on - strand, within H281DRAFT_01182 at 19.235 kb on - strand, within H281DRAFT_01182
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 15,895 + H281DRAFT_01180 0.66 +0.3 15,951 - H281DRAFT_01180 0.69 -0.2 16,395 - H281DRAFT_01180 0.88 -0.3 16,562 - -0.8 16,750 - -0.3 17,347 + H281DRAFT_01181 0.29 +0.8 17,727 + H281DRAFT_01181 0.48 +0.5 17,728 - H281DRAFT_01181 0.48 +1.8 17,808 + H281DRAFT_01181 0.52 +0.1 17,821 - H281DRAFT_01181 0.52 +1.0 18,128 - H281DRAFT_01181 0.67 +0.3 18,669 + +0.7 18,740 + +0.2 18,741 - +0.8 18,792 - -0.4 18,876 + -0.6 18,876 + +0.0 18,877 - -0.4 19,163 - H281DRAFT_01182 0.50 +0.4 19,235 - H281DRAFT_01182 0.62 +0.4
Or see this region's nucleotide sequence