Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01143 and H281DRAFT_01144 are separated by 325 nucleotides H281DRAFT_01144 and H281DRAFT_01145 are separated by 23 nucleotides H281DRAFT_01145 and H281DRAFT_01146 overlap by 11 nucleotides
H281DRAFT_01143: H281DRAFT_01143 - 2,5-furandicarboxylate decarboxylase 1, at 1,291,300 to 1,292,784
_01143
H281DRAFT_01144: H281DRAFT_01144 - transcriptional regulator, LysR family, at 1,293,110 to 1,294,033
_01144
H281DRAFT_01145: H281DRAFT_01145 - hopanoid biosynthesis associated protein HpnK, at 1,294,057 to 1,294,953
_01145
H281DRAFT_01146: H281DRAFT_01146 - ceramide glucosyltransferase, at 1,294,943 to 1,296,316
_01146
Position (kb) 1293
1294
1295 Strain fitness (log2 ratio) -1
0
1 at 1292.364 kb on + strand, within H281DRAFT_01143 at 1292.403 kb on + strand, within H281DRAFT_01143 at 1292.404 kb on - strand, within H281DRAFT_01143 at 1292.407 kb on + strand, within H281DRAFT_01143 at 1292.408 kb on - strand, within H281DRAFT_01143 at 1292.778 kb on + strand at 1292.931 kb on - strand at 1292.999 kb on + strand at 1293.000 kb on - strand at 1293.000 kb on - strand at 1293.081 kb on - strand at 1293.302 kb on + strand, within H281DRAFT_01144 at 1294.215 kb on - strand, within H281DRAFT_01145 at 1294.217 kb on - strand, within H281DRAFT_01145
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,292,364 + H281DRAFT_01143 0.72 -0.6 1,292,403 + H281DRAFT_01143 0.74 +0.4 1,292,404 - H281DRAFT_01143 0.74 +0.5 1,292,407 + H281DRAFT_01143 0.75 +0.1 1,292,408 - H281DRAFT_01143 0.75 +0.3 1,292,778 + -0.6 1,292,931 - -0.4 1,292,999 + +0.5 1,293,000 - -0.0 1,293,000 - -0.2 1,293,081 - +0.0 1,293,302 + H281DRAFT_01144 0.21 +0.3 1,294,215 - H281DRAFT_01145 0.18 +0.1 1,294,217 - H281DRAFT_01145 0.18 +0.4
Or see this region's nucleotide sequence