Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26920 and BWI76_RS26925 overlap by 23 nucleotides BWI76_RS26925 and BWI76_RS26930 overlap by 38 nucleotides BWI76_RS26930 and BWI76_RS26935 are separated by 167 nucleotides BWI76_RS26935 and BWI76_RS26940 are separated by 93 nucleotides
BWI76_RS26920: BWI76_RS26920 - DNA-3-methyladenine glycosylase I, at 5,584,340 to 5,584,921
_RS26920
BWI76_RS26925: BWI76_RS26925 - N-acetyltransferase, at 5,584,899 to 5,585,345
_RS26925
BWI76_RS26930: BWI76_RS26930 - biotin sulfoxide reductase, at 5,585,308 to 5,587,638
_RS26930
BWI76_RS26935: BWI76_RS26935 - OmpA family lipoprotein, at 5,587,806 to 5,588,468
_RS26935
BWI76_RS26940: BWI76_RS26940 - transcriptional regulator, at 5,588,562 to 5,589,578
_RS26940
Position (kb) 5585
5586
5587
5588 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5584.329 kb on + strand at 5584.378 kb on - strand at 5584.378 kb on - strand at 5584.515 kb on + strand, within BWI76_RS26920 at 5584.533 kb on - strand, within BWI76_RS26920 at 5584.571 kb on + strand, within BWI76_RS26920 at 5584.830 kb on + strand, within BWI76_RS26920 at 5584.830 kb on + strand, within BWI76_RS26920 at 5584.840 kb on + strand, within BWI76_RS26920 at 5584.848 kb on - strand, within BWI76_RS26920 at 5584.852 kb on + strand, within BWI76_RS26920 at 5584.900 kb on - strand at 5585.003 kb on - strand, within BWI76_RS26925 at 5585.097 kb on - strand, within BWI76_RS26925 at 5585.165 kb on + strand, within BWI76_RS26925 at 5585.200 kb on + strand at 5585.200 kb on + strand, within BWI76_RS26925 at 5585.200 kb on + strand, within BWI76_RS26925 at 5585.200 kb on + strand, within BWI76_RS26925 at 5585.200 kb on + strand, within BWI76_RS26925 at 5585.200 kb on + strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.208 kb on - strand, within BWI76_RS26925 at 5585.244 kb on - strand, within BWI76_RS26925 at 5585.255 kb on - strand, within BWI76_RS26925 at 5585.312 kb on + strand at 5585.475 kb on + strand at 5585.625 kb on + strand, within BWI76_RS26930 at 5585.633 kb on - strand, within BWI76_RS26930 at 5585.726 kb on + strand, within BWI76_RS26930 at 5585.747 kb on - strand, within BWI76_RS26930 at 5586.496 kb on + strand, within BWI76_RS26930 at 5586.499 kb on - strand, within BWI76_RS26930 at 5586.674 kb on - strand, within BWI76_RS26930 at 5586.870 kb on + strand, within BWI76_RS26930 at 5586.878 kb on - strand, within BWI76_RS26930 at 5586.967 kb on + strand, within BWI76_RS26930 at 5587.177 kb on + strand, within BWI76_RS26930 at 5587.277 kb on + strand, within BWI76_RS26930 at 5587.455 kb on + strand at 5587.643 kb on + strand at 5587.669 kb on + strand at 5587.877 kb on + strand, within BWI76_RS26935 at 5587.877 kb on + strand, within BWI76_RS26935 at 5587.877 kb on + strand, within BWI76_RS26935 at 5587.885 kb on - strand, within BWI76_RS26935 at 5587.885 kb on - strand, within BWI76_RS26935 at 5587.947 kb on + strand, within BWI76_RS26935 at 5587.948 kb on + strand, within BWI76_RS26935 at 5587.956 kb on - strand, within BWI76_RS26935 at 5587.956 kb on - strand, within BWI76_RS26935 at 5588.049 kb on - strand, within BWI76_RS26935 at 5588.067 kb on - strand, within BWI76_RS26935 at 5588.196 kb on - strand, within BWI76_RS26935 at 5588.280 kb on + strand, within BWI76_RS26935 at 5588.419 kb on + strand at 5588.424 kb on + strand at 5588.503 kb on + strand at 5588.564 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 5,584,329 + +1.0 5,584,378 - +0.2 5,584,378 - +0.5 5,584,515 + BWI76_RS26920 0.30 -0.2 5,584,533 - BWI76_RS26920 0.33 +0.4 5,584,571 + BWI76_RS26920 0.40 +0.6 5,584,830 + BWI76_RS26920 0.84 -3.7 5,584,830 + BWI76_RS26920 0.84 -0.8 5,584,840 + BWI76_RS26920 0.86 -2.0 5,584,848 - BWI76_RS26920 0.87 +0.8 5,584,852 + BWI76_RS26920 0.88 +1.1 5,584,900 - +0.7 5,585,003 - BWI76_RS26925 0.23 -0.6 5,585,097 - BWI76_RS26925 0.44 +0.4 5,585,165 + BWI76_RS26925 0.60 -0.4 5,585,200 + -0.2 5,585,200 + BWI76_RS26925 0.67 +0.8 5,585,200 + BWI76_RS26925 0.67 -1.7 5,585,200 + BWI76_RS26925 0.67 -0.3 5,585,200 + BWI76_RS26925 0.67 +1.5 5,585,200 + BWI76_RS26925 0.67 +1.5 5,585,208 - BWI76_RS26925 0.69 -0.2 5,585,208 - BWI76_RS26925 0.69 +1.0 5,585,208 - BWI76_RS26925 0.69 +0.2 5,585,208 - BWI76_RS26925 0.69 +0.5 5,585,208 - BWI76_RS26925 0.69 +1.9 5,585,208 - BWI76_RS26925 0.69 -0.9 5,585,208 - BWI76_RS26925 0.69 +1.0 5,585,244 - BWI76_RS26925 0.77 +1.3 5,585,255 - BWI76_RS26925 0.80 +0.4 5,585,312 + -0.1 5,585,475 + -2.2 5,585,625 + BWI76_RS26930 0.14 -1.8 5,585,633 - BWI76_RS26930 0.14 -0.2 5,585,726 + BWI76_RS26930 0.18 +2.4 5,585,747 - BWI76_RS26930 0.19 +1.6 5,586,496 + BWI76_RS26930 0.51 +0.9 5,586,499 - BWI76_RS26930 0.51 +0.2 5,586,674 - BWI76_RS26930 0.59 -0.0 5,586,870 + BWI76_RS26930 0.67 +0.9 5,586,878 - BWI76_RS26930 0.67 +0.7 5,586,967 + BWI76_RS26930 0.71 +1.3 5,587,177 + BWI76_RS26930 0.80 -1.7 5,587,277 + BWI76_RS26930 0.84 -0.4 5,587,455 + +0.9 5,587,643 + +0.5 5,587,669 + -0.2 5,587,877 + BWI76_RS26935 0.11 -1.1 5,587,877 + BWI76_RS26935 0.11 +0.1 5,587,877 + BWI76_RS26935 0.11 +0.1 5,587,885 - BWI76_RS26935 0.12 +2.3 5,587,885 - BWI76_RS26935 0.12 +0.7 5,587,947 + BWI76_RS26935 0.21 -0.2 5,587,948 + BWI76_RS26935 0.21 -1.0 5,587,956 - BWI76_RS26935 0.23 -2.1 5,587,956 - BWI76_RS26935 0.23 -3.0 5,588,049 - BWI76_RS26935 0.37 +1.4 5,588,067 - BWI76_RS26935 0.39 -1.3 5,588,196 - BWI76_RS26935 0.59 +0.2 5,588,280 + BWI76_RS26935 0.71 +0.1 5,588,419 + -0.4 5,588,424 + -0.2 5,588,503 + +0.7 5,588,564 + +0.3
Or see this region's nucleotide sequence