Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26865 and BWI76_RS26870 overlap by 4 nucleotides BWI76_RS26870 and BWI76_RS26875 are separated by 10 nucleotides BWI76_RS26875 and BWI76_RS26880 are separated by 9 nucleotides
BWI76_RS26865: BWI76_RS26865 - dipeptide ABC transporter ATP-binding protein, at 5,573,511 to 5,574,524
_RS26865
BWI76_RS26870: BWI76_RS26870 - dipeptide ABC transporter ATP-binding protein, at 5,574,521 to 5,575,504
_RS26870
BWI76_RS26875: BWI76_RS26875 - dipeptide ABC transporter permease DppC, at 5,575,515 to 5,576,417
_RS26875
BWI76_RS26880: BWI76_RS26880 - dipeptide ABC transporter permease DppB, at 5,576,427 to 5,577,446
_RS26880
Position (kb) 5575
5576
5577 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 5574.579 kb on + strand at 5574.603 kb on - strand at 5574.719 kb on - strand, within BWI76_RS26870 at 5574.920 kb on - strand, within BWI76_RS26870 at 5575.027 kb on + strand, within BWI76_RS26870 at 5575.061 kb on - strand, within BWI76_RS26870 at 5575.193 kb on - strand, within BWI76_RS26870 at 5575.242 kb on + strand, within BWI76_RS26870 at 5575.290 kb on - strand, within BWI76_RS26870 at 5575.411 kb on + strand at 5575.411 kb on + strand at 5575.526 kb on + strand at 5575.550 kb on + strand at 5575.565 kb on + strand at 5575.667 kb on + strand, within BWI76_RS26875 at 5575.766 kb on + strand, within BWI76_RS26875 at 5575.868 kb on + strand, within BWI76_RS26875 at 5576.093 kb on + strand, within BWI76_RS26875 at 5576.093 kb on + strand, within BWI76_RS26875 at 5576.310 kb on - strand at 5576.458 kb on - strand at 5576.469 kb on - strand at 5576.565 kb on - strand, within BWI76_RS26880 at 5576.619 kb on + strand, within BWI76_RS26880 at 5576.622 kb on - strand, within BWI76_RS26880 at 5576.674 kb on - strand, within BWI76_RS26880 at 5576.744 kb on - strand, within BWI76_RS26880 at 5576.744 kb on - strand, within BWI76_RS26880 at 5576.828 kb on + strand, within BWI76_RS26880 at 5576.828 kb on + strand, within BWI76_RS26880 at 5576.891 kb on + strand, within BWI76_RS26880 at 5576.891 kb on + strand, within BWI76_RS26880 at 5576.974 kb on + strand, within BWI76_RS26880 at 5577.151 kb on - strand, within BWI76_RS26880 at 5577.151 kb on - strand, within BWI76_RS26880 at 5577.163 kb on - strand, within BWI76_RS26880 at 5577.210 kb on + strand, within BWI76_RS26880
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 5,574,579 + -2.3 5,574,603 - -2.0 5,574,719 - BWI76_RS26870 0.20 -0.8 5,574,920 - BWI76_RS26870 0.41 +0.5 5,575,027 + BWI76_RS26870 0.51 -0.2 5,575,061 - BWI76_RS26870 0.55 -1.0 5,575,193 - BWI76_RS26870 0.68 -3.2 5,575,242 + BWI76_RS26870 0.73 -2.2 5,575,290 - BWI76_RS26870 0.78 -1.0 5,575,411 + -1.9 5,575,411 + -0.9 5,575,526 + +0.3 5,575,550 + -4.8 5,575,565 + -0.3 5,575,667 + BWI76_RS26875 0.17 -1.8 5,575,766 + BWI76_RS26875 0.28 -1.9 5,575,868 + BWI76_RS26875 0.39 -0.0 5,576,093 + BWI76_RS26875 0.64 -0.2 5,576,093 + BWI76_RS26875 0.64 -0.1 5,576,310 - +3.0 5,576,458 - -0.9 5,576,469 - -1.1 5,576,565 - BWI76_RS26880 0.14 -3.1 5,576,619 + BWI76_RS26880 0.19 -4.7 5,576,622 - BWI76_RS26880 0.19 -3.9 5,576,674 - BWI76_RS26880 0.24 -0.1 5,576,744 - BWI76_RS26880 0.31 -2.4 5,576,744 - BWI76_RS26880 0.31 -0.8 5,576,828 + BWI76_RS26880 0.39 -1.3 5,576,828 + BWI76_RS26880 0.39 -0.9 5,576,891 + BWI76_RS26880 0.45 -2.9 5,576,891 + BWI76_RS26880 0.45 -0.7 5,576,974 + BWI76_RS26880 0.54 -1.0 5,577,151 - BWI76_RS26880 0.71 +0.4 5,577,151 - BWI76_RS26880 0.71 -2.0 5,577,163 - BWI76_RS26880 0.72 -2.3 5,577,210 + BWI76_RS26880 0.77 -2.7
Or see this region's nucleotide sequence