Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22850

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22835 and BWI76_RS22840 overlap by 35 nucleotidesBWI76_RS22840 and BWI76_RS22845 are separated by 399 nucleotidesBWI76_RS22845 and BWI76_RS22850 are separated by 2 nucleotidesBWI76_RS22850 and BWI76_RS22855 overlap by 1 nucleotidesBWI76_RS22855 and BWI76_RS22860 are separated by 633 nucleotides BWI76_RS22835: BWI76_RS22835 - MFS transporter, at 4,765,256 to 4,766,614 _RS22835 BWI76_RS22840: BWI76_RS22840 - transposase, at 4,766,580 to 4,766,699 _RS22840 BWI76_RS22845: BWI76_RS22845 - flavodoxin, at 4,767,099 to 4,767,542 _RS22845 BWI76_RS22850: BWI76_RS22850 - tRNA pseudouridine synthase TruC, at 4,767,545 to 4,768,339 _RS22850 BWI76_RS22855: BWI76_RS22855 - hypothetical protein, at 4,768,339 to 4,768,668 _RS22855 BWI76_RS22860: BWI76_RS22860 - SecY-interacting protein, at 4,769,302 to 4,769,847 _RS22860 Position (kb) 4767 4768 4769Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4766.553 kb on + strandat 4766.674 kb on - strand, within BWI76_RS22840at 4766.769 kb on + strandat 4766.791 kb on + strandat 4766.832 kb on + strandat 4766.892 kb on - strandat 4766.995 kb on - strandat 4767.042 kb on + strandat 4767.083 kb on - strandat 4767.118 kb on - strandat 4767.212 kb on - strand, within BWI76_RS22845at 4767.252 kb on - strand, within BWI76_RS22845at 4767.291 kb on + strand, within BWI76_RS22845at 4767.299 kb on - strand, within BWI76_RS22845at 4767.335 kb on + strand, within BWI76_RS22845at 4767.408 kb on + strand, within BWI76_RS22845at 4767.889 kb on + strand, within BWI76_RS22850at 4768.137 kb on + strand, within BWI76_RS22850at 4768.291 kb on - strandat 4768.370 kb on + strandat 4768.428 kb on + strand, within BWI76_RS22855at 4768.530 kb on + strand, within BWI76_RS22855at 4768.538 kb on - strand, within BWI76_RS22855at 4768.610 kb on - strand, within BWI76_RS22855at 4768.748 kb on - strandat 4768.748 kb on - strandat 4768.803 kb on - strandat 4768.859 kb on - strandat 4768.902 kb on - strandat 4768.904 kb on + strandat 4768.985 kb on - strandat 4769.116 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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4,766,553 + -0.5
4,766,674 - BWI76_RS22840 0.78 -0.1
4,766,769 + -0.3
4,766,791 + +1.8
4,766,832 + +0.4
4,766,892 - +0.0
4,766,995 - +0.4
4,767,042 + -1.6
4,767,083 - +0.8
4,767,118 - -0.1
4,767,212 - BWI76_RS22845 0.25 -2.0
4,767,252 - BWI76_RS22845 0.34 +0.1
4,767,291 + BWI76_RS22845 0.43 +1.9
4,767,299 - BWI76_RS22845 0.45 +0.1
4,767,335 + BWI76_RS22845 0.53 +0.2
4,767,408 + BWI76_RS22845 0.70 +2.8
4,767,889 + BWI76_RS22850 0.43 -1.1
4,768,137 + BWI76_RS22850 0.74 -3.1
4,768,291 - -0.5
4,768,370 + +0.1
4,768,428 + BWI76_RS22855 0.27 +1.6
4,768,530 + BWI76_RS22855 0.58 -3.0
4,768,538 - BWI76_RS22855 0.60 +0.7
4,768,610 - BWI76_RS22855 0.82 +2.6
4,768,748 - +0.1
4,768,748 - +0.1
4,768,803 - +0.5
4,768,859 - -0.5
4,768,902 - +1.7
4,768,904 + -0.8
4,768,985 - +0.3
4,769,116 + +0.0

Or see this region's nucleotide sequence