Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19710

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19705 and BWI76_RS19710 are separated by 32 nucleotidesBWI76_RS19710 and BWI76_RS19715 are separated by 95 nucleotides BWI76_RS19705: BWI76_RS19705 - kinase, at 4,118,306 to 4,119,394 _RS19705 BWI76_RS19710: BWI76_RS19710 - NupC/NupG family nucleoside CNT transporter, at 4,119,427 to 4,120,677 _RS19710 BWI76_RS19715: BWI76_RS19715 - pseudouridine-5'-phosphate glycosidase, at 4,120,773 to 4,121,708 _RS19715 Position (kb) 4119 4120 4121Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4118.511 kb on - strand, within BWI76_RS19705at 4118.776 kb on + strand, within BWI76_RS19705at 4118.876 kb on + strand, within BWI76_RS19705at 4118.918 kb on + strand, within BWI76_RS19705at 4119.258 kb on - strand, within BWI76_RS19705at 4119.258 kb on - strand, within BWI76_RS19705at 4119.470 kb on + strandat 4119.474 kb on - strandat 4119.744 kb on - strand, within BWI76_RS19710at 4119.813 kb on + strand, within BWI76_RS19710at 4120.020 kb on + strand, within BWI76_RS19710at 4120.572 kb on + strandat 4120.646 kb on + strandat 4120.659 kb on - strandat 4120.712 kb on + strandat 4120.777 kb on - strandat 4120.832 kb on - strandat 4121.025 kb on + strand, within BWI76_RS19715at 4121.068 kb on + strand, within BWI76_RS19715at 4121.069 kb on - strand, within BWI76_RS19715at 4121.074 kb on + strand, within BWI76_RS19715at 4121.079 kb on + strand, within BWI76_RS19715at 4121.084 kb on + strand, within BWI76_RS19715at 4121.085 kb on - strand, within BWI76_RS19715at 4121.087 kb on - strand, within BWI76_RS19715at 4121.096 kb on + strand, within BWI76_RS19715at 4121.116 kb on - strand, within BWI76_RS19715at 4121.132 kb on + strand, within BWI76_RS19715at 4121.140 kb on - strand, within BWI76_RS19715at 4121.162 kb on + strand, within BWI76_RS19715at 4121.163 kb on + strand, within BWI76_RS19715at 4121.170 kb on - strand, within BWI76_RS19715at 4121.221 kb on + strand, within BWI76_RS19715at 4121.229 kb on - strand, within BWI76_RS19715at 4121.229 kb on - strand, within BWI76_RS19715at 4121.229 kb on - strand, within BWI76_RS19715at 4121.229 kb on - strand, within BWI76_RS19715at 4121.229 kb on - strand, within BWI76_RS19715at 4121.231 kb on + strand, within BWI76_RS19715at 4121.239 kb on - strand, within BWI76_RS19715at 4121.239 kb on - strand, within BWI76_RS19715at 4121.239 kb on - strand, within BWI76_RS19715at 4121.255 kb on + strand, within BWI76_RS19715at 4121.298 kb on - strand, within BWI76_RS19715at 4121.298 kb on - strand, within BWI76_RS19715at 4121.298 kb on - strand, within BWI76_RS19715at 4121.300 kb on - strand, within BWI76_RS19715at 4121.305 kb on - strand, within BWI76_RS19715at 4121.308 kb on - strand, within BWI76_RS19715at 4121.338 kb on - strand, within BWI76_RS19715at 4121.367 kb on + strand, within BWI76_RS19715at 4121.374 kb on - strand, within BWI76_RS19715at 4121.374 kb on - strand, within BWI76_RS19715at 4121.375 kb on - strand, within BWI76_RS19715at 4121.375 kb on - strand, within BWI76_RS19715at 4121.385 kb on + strand, within BWI76_RS19715at 4121.385 kb on + strand, within BWI76_RS19715at 4121.437 kb on + strand, within BWI76_RS19715at 4121.437 kb on - strand, within BWI76_RS19715at 4121.439 kb on + strand, within BWI76_RS19715at 4121.439 kb on + strand, within BWI76_RS19715at 4121.439 kb on + strand, within BWI76_RS19715at 4121.439 kb on + strand, within BWI76_RS19715at 4121.439 kb on + strand, within BWI76_RS19715at 4121.439 kb on + strand, within BWI76_RS19715at 4121.445 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.447 kb on - strand, within BWI76_RS19715at 4121.452 kb on - strand, within BWI76_RS19715at 4121.462 kb on + strand, within BWI76_RS19715at 4121.462 kb on - strand, within BWI76_RS19715at 4121.470 kb on - strand, within BWI76_RS19715at 4121.486 kb on - strand, within BWI76_RS19715at 4121.486 kb on - strand, within BWI76_RS19715at 4121.486 kb on - strand, within BWI76_RS19715at 4121.533 kb on + strand, within BWI76_RS19715at 4121.557 kb on + strand, within BWI76_RS19715at 4121.589 kb on + strand, within BWI76_RS19715at 4121.590 kb on + strand, within BWI76_RS19715at 4121.611 kb on - strand, within BWI76_RS19715

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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4,118,511 - BWI76_RS19705 0.19 -4.4
4,118,776 + BWI76_RS19705 0.43 -0.5
4,118,876 + BWI76_RS19705 0.52 +0.8
4,118,918 + BWI76_RS19705 0.56 -1.7
4,119,258 - BWI76_RS19705 0.87 -0.6
4,119,258 - BWI76_RS19705 0.87 -2.8
4,119,470 + -0.1
4,119,474 - +0.5
4,119,744 - BWI76_RS19710 0.25 -2.6
4,119,813 + BWI76_RS19710 0.31 -1.0
4,120,020 + BWI76_RS19710 0.47 -0.8
4,120,572 + -2.3
4,120,646 + +0.6
4,120,659 - -0.1
4,120,712 + -1.1
4,120,777 - +2.0
4,120,832 - -0.3
4,121,025 + BWI76_RS19715 0.27 -1.9
4,121,068 + BWI76_RS19715 0.32 -1.1
4,121,069 - BWI76_RS19715 0.32 +0.9
4,121,074 + BWI76_RS19715 0.32 -2.0
4,121,079 + BWI76_RS19715 0.33 +0.5
4,121,084 + BWI76_RS19715 0.33 -0.4
4,121,085 - BWI76_RS19715 0.33 +1.5
4,121,087 - BWI76_RS19715 0.34 -0.6
4,121,096 + BWI76_RS19715 0.35 -0.4
4,121,116 - BWI76_RS19715 0.37 -0.2
4,121,132 + BWI76_RS19715 0.38 -0.2
4,121,140 - BWI76_RS19715 0.39 -1.1
4,121,162 + BWI76_RS19715 0.42 +0.7
4,121,163 + BWI76_RS19715 0.42 +0.5
4,121,170 - BWI76_RS19715 0.42 -1.0
4,121,221 + BWI76_RS19715 0.48 -2.1
4,121,229 - BWI76_RS19715 0.49 -3.0
4,121,229 - BWI76_RS19715 0.49 -2.5
4,121,229 - BWI76_RS19715 0.49 -1.3
4,121,229 - BWI76_RS19715 0.49 +2.8
4,121,229 - BWI76_RS19715 0.49 -1.0
4,121,231 + BWI76_RS19715 0.49 +1.5
4,121,239 - BWI76_RS19715 0.50 +0.3
4,121,239 - BWI76_RS19715 0.50 +0.6
4,121,239 - BWI76_RS19715 0.50 -0.8
4,121,255 + BWI76_RS19715 0.51 +0.4
4,121,298 - BWI76_RS19715 0.56 -1.0
4,121,298 - BWI76_RS19715 0.56 -1.0
4,121,298 - BWI76_RS19715 0.56 -0.6
4,121,300 - BWI76_RS19715 0.56 -0.5
4,121,305 - BWI76_RS19715 0.57 +2.1
4,121,308 - BWI76_RS19715 0.57 +0.4
4,121,338 - BWI76_RS19715 0.60 -1.9
4,121,367 + BWI76_RS19715 0.63 -0.5
4,121,374 - BWI76_RS19715 0.64 +0.6
4,121,374 - BWI76_RS19715 0.64 -3.3
4,121,375 - BWI76_RS19715 0.64 -2.2
4,121,375 - BWI76_RS19715 0.64 -1.7
4,121,385 + BWI76_RS19715 0.65 -1.9
4,121,385 + BWI76_RS19715 0.65 +1.3
4,121,437 + BWI76_RS19715 0.71 -2.7
4,121,437 - BWI76_RS19715 0.71 +0.3
4,121,439 + BWI76_RS19715 0.71 +2.0
4,121,439 + BWI76_RS19715 0.71 -0.4
4,121,439 + BWI76_RS19715 0.71 +0.8
4,121,439 + BWI76_RS19715 0.71 -1.7
4,121,439 + BWI76_RS19715 0.71 +2.9
4,121,439 + BWI76_RS19715 0.71 -0.4
4,121,445 - BWI76_RS19715 0.72 -0.8
4,121,447 - BWI76_RS19715 0.72 -1.6
4,121,447 - BWI76_RS19715 0.72 -0.2
4,121,447 - BWI76_RS19715 0.72 -1.6
4,121,447 - BWI76_RS19715 0.72 +1.8
4,121,447 - BWI76_RS19715 0.72 -0.4
4,121,447 - BWI76_RS19715 0.72 +1.9
4,121,447 - BWI76_RS19715 0.72 -2.7
4,121,447 - BWI76_RS19715 0.72 +1.1
4,121,447 - BWI76_RS19715 0.72 +0.8
4,121,452 - BWI76_RS19715 0.73 +1.7
4,121,462 + BWI76_RS19715 0.74 -2.8
4,121,462 - BWI76_RS19715 0.74 +0.1
4,121,470 - BWI76_RS19715 0.74 +1.3
4,121,486 - BWI76_RS19715 0.76 +2.4
4,121,486 - BWI76_RS19715 0.76 +1.0
4,121,486 - BWI76_RS19715 0.76 -1.4
4,121,533 + BWI76_RS19715 0.81 +0.1
4,121,557 + BWI76_RS19715 0.84 -1.4
4,121,589 + BWI76_RS19715 0.87 -4.5
4,121,590 + BWI76_RS19715 0.87 -1.3
4,121,611 - BWI76_RS19715 0.90 -0.7

Or see this region's nucleotide sequence