Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17840

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17830 and BWI76_RS17835 are separated by 10 nucleotidesBWI76_RS17835 and BWI76_RS17840 are separated by 9 nucleotidesBWI76_RS17840 and BWI76_RS17845 are separated by 11 nucleotides BWI76_RS17830: BWI76_RS17830 - ABC transporter ATP-binding protein, at 3,706,113 to 3,707,207 _RS17830 BWI76_RS17835: BWI76_RS17835 - sugar ABC transporter permease, at 3,707,218 to 3,708,057 _RS17835 BWI76_RS17840: BWI76_RS17840 - sugar ABC transporter permease, at 3,708,067 to 3,709,008 _RS17840 BWI76_RS17845: BWI76_RS17845 - extracellular solute-binding protein, at 3,709,020 to 3,710,309 _RS17845 Position (kb) 3708 3709 3710Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3707.192 kb on + strandat 3707.397 kb on - strand, within BWI76_RS17835at 3707.530 kb on - strand, within BWI76_RS17835at 3707.588 kb on - strand, within BWI76_RS17835at 3707.643 kb on - strand, within BWI76_RS17835at 3707.704 kb on - strand, within BWI76_RS17835at 3707.866 kb on + strand, within BWI76_RS17835at 3707.961 kb on - strand, within BWI76_RS17835at 3707.997 kb on - strandat 3708.210 kb on + strand, within BWI76_RS17840at 3708.218 kb on + strand, within BWI76_RS17840at 3708.297 kb on - strand, within BWI76_RS17840at 3708.516 kb on + strand, within BWI76_RS17840at 3708.659 kb on + strand, within BWI76_RS17840at 3708.719 kb on + strand, within BWI76_RS17840at 3708.761 kb on - strand, within BWI76_RS17840at 3708.797 kb on - strand, within BWI76_RS17840at 3708.797 kb on - strand, within BWI76_RS17840at 3708.923 kb on + strandat 3709.330 kb on - strand, within BWI76_RS17845at 3709.423 kb on + strand, within BWI76_RS17845at 3709.431 kb on - strand, within BWI76_RS17845at 3709.431 kb on - strand, within BWI76_RS17845at 3709.431 kb on - strand, within BWI76_RS17845at 3709.458 kb on + strand, within BWI76_RS17845at 3709.469 kb on + strand, within BWI76_RS17845at 3709.472 kb on - strand, within BWI76_RS17845at 3709.504 kb on + strand, within BWI76_RS17845at 3709.953 kb on + strand, within BWI76_RS17845at 3709.961 kb on - strand, within BWI76_RS17845

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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3,707,192 + -0.2
3,707,397 - BWI76_RS17835 0.21 +0.4
3,707,530 - BWI76_RS17835 0.37 -0.5
3,707,588 - BWI76_RS17835 0.44 -0.2
3,707,643 - BWI76_RS17835 0.51 -0.3
3,707,704 - BWI76_RS17835 0.58 -2.5
3,707,866 + BWI76_RS17835 0.77 -2.4
3,707,961 - BWI76_RS17835 0.88 -1.9
3,707,997 - -0.6
3,708,210 + BWI76_RS17840 0.15 +0.4
3,708,218 + BWI76_RS17840 0.16 +0.1
3,708,297 - BWI76_RS17840 0.24 +1.3
3,708,516 + BWI76_RS17840 0.48 -0.1
3,708,659 + BWI76_RS17840 0.63 +0.8
3,708,719 + BWI76_RS17840 0.69 +2.0
3,708,761 - BWI76_RS17840 0.74 -1.2
3,708,797 - BWI76_RS17840 0.77 -1.1
3,708,797 - BWI76_RS17840 0.77 -3.7
3,708,923 + -1.0
3,709,330 - BWI76_RS17845 0.24 +1.7
3,709,423 + BWI76_RS17845 0.31 +1.2
3,709,431 - BWI76_RS17845 0.32 -0.8
3,709,431 - BWI76_RS17845 0.32 +1.1
3,709,431 - BWI76_RS17845 0.32 -1.0
3,709,458 + BWI76_RS17845 0.34 +0.9
3,709,469 + BWI76_RS17845 0.35 -0.4
3,709,472 - BWI76_RS17845 0.35 -1.1
3,709,504 + BWI76_RS17845 0.38 -1.3
3,709,953 + BWI76_RS17845 0.72 +1.4
3,709,961 - BWI76_RS17845 0.73 +0.1

Or see this region's nucleotide sequence