Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11945

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11940 and BWI76_RS11945 are separated by 56 nucleotidesBWI76_RS11945 and BWI76_RS11950 are separated by 161 nucleotides BWI76_RS11940: BWI76_RS11940 - aconitate hydratase 1, at 2,513,339 to 2,516,011 _RS11940 BWI76_RS11945: BWI76_RS11945 - GTP cyclohydrolase II, at 2,516,068 to 2,516,658 _RS11945 BWI76_RS11950: BWI76_RS11950 - phosphatidylglycerophosphatase B, at 2,516,820 to 2,517,587 _RS11950 Position (kb) 2516 2517Strain fitness (log2 ratio) -3 -2 -1 0 1at 2515.148 kb on + strand, within BWI76_RS11940at 2515.153 kb on - strand, within BWI76_RS11940at 2515.326 kb on - strand, within BWI76_RS11940at 2515.761 kb on + strandat 2516.688 kb on - strandat 2516.753 kb on - strandat 2516.942 kb on + strand, within BWI76_RS11950at 2516.947 kb on - strand, within BWI76_RS11950at 2517.084 kb on + strand, within BWI76_RS11950at 2517.098 kb on - strand, within BWI76_RS11950at 2517.339 kb on + strand, within BWI76_RS11950at 2517.340 kb on + strand, within BWI76_RS11950at 2517.345 kb on + strand, within BWI76_RS11950at 2517.523 kb on - strandat 2517.610 kb on - strandat 2517.649 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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2,515,148 + BWI76_RS11940 0.68 -2.7
2,515,153 - BWI76_RS11940 0.68 +0.6
2,515,326 - BWI76_RS11940 0.74 +0.5
2,515,761 + -0.8
2,516,688 - -1.8
2,516,753 - -2.2
2,516,942 + BWI76_RS11950 0.16 -0.3
2,516,947 - BWI76_RS11950 0.17 -1.5
2,517,084 + BWI76_RS11950 0.34 +0.2
2,517,098 - BWI76_RS11950 0.36 -1.3
2,517,339 + BWI76_RS11950 0.68 +0.3
2,517,340 + BWI76_RS11950 0.68 -1.6
2,517,345 + BWI76_RS11950 0.68 -3.5
2,517,523 - -1.8
2,517,610 - +0.9
2,517,649 - -0.6

Or see this region's nucleotide sequence