Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11745 and BWI76_RS11750 are separated by 12 nucleotides BWI76_RS11750 and BWI76_RS11755 are separated by 40 nucleotides BWI76_RS11755 and BWI76_RS11760 are separated by 97 nucleotides BWI76_RS11760 and BWI76_RS11765 are separated by 74 nucleotides
BWI76_RS11745: BWI76_RS11745 - 6-phospho-beta-glucosidase, at 2,470,400 to 2,471,746
_RS11745
BWI76_RS11750: BWI76_RS11750 - chitooligosaccharide deacetylase, at 2,471,759 to 2,472,517
_RS11750
BWI76_RS11755: BWI76_RS11755 - catalase HPII, at 2,472,558 to 2,474,816
_RS11755
BWI76_RS11760: BWI76_RS11760 - cell division protein, at 2,474,914 to 2,475,252
_RS11760
BWI76_RS11765: BWI76_RS11765 - bifunctional transporter/kinase, at 2,475,327 to 2,476,718
_RS11765
Position (kb)
2472
2473
2474
2475 Strain fitness (log2 ratio)
-2
-1
0
1 at 2471.580 kb on + strand, within BWI76_RS11745 at 2471.691 kb on + strand at 2471.713 kb on - strand at 2471.784 kb on - strand at 2471.861 kb on - strand, within BWI76_RS11750 at 2472.165 kb on - strand, within BWI76_RS11750 at 2472.333 kb on + strand, within BWI76_RS11750 at 2472.443 kb on - strand at 2472.520 kb on - strand at 2472.994 kb on + strand, within BWI76_RS11755 at 2473.066 kb on + strand, within BWI76_RS11755 at 2473.110 kb on - strand, within BWI76_RS11755 at 2473.303 kb on + strand, within BWI76_RS11755 at 2473.370 kb on + strand, within BWI76_RS11755 at 2473.437 kb on - strand, within BWI76_RS11755 at 2474.794 kb on + strand at 2475.122 kb on - strand, within BWI76_RS11760 at 2475.325 kb on + strand at 2475.325 kb on + strand at 2475.455 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 2,471,580 + BWI76_RS11745 0.88 +0.0 2,471,691 + -0.5 2,471,713 - -2.3 2,471,784 - +0.1 2,471,861 - BWI76_RS11750 0.13 +0.6 2,472,165 - BWI76_RS11750 0.53 -0.0 2,472,333 + BWI76_RS11750 0.76 -1.0 2,472,443 - +1.0 2,472,520 - -0.4 2,472,994 + BWI76_RS11755 0.19 -0.4 2,473,066 + BWI76_RS11755 0.22 -1.0 2,473,110 - BWI76_RS11755 0.24 -0.6 2,473,303 + BWI76_RS11755 0.33 -2.1 2,473,370 + BWI76_RS11755 0.36 +0.2 2,473,437 - BWI76_RS11755 0.39 -1.6 2,474,794 + +0.4 2,475,122 - BWI76_RS11760 0.61 -0.8 2,475,325 + -1.3 2,475,325 + +0.3 2,475,455 - -0.6
Or see this region's nucleotide sequence