Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11755

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11745 and BWI76_RS11750 are separated by 12 nucleotidesBWI76_RS11750 and BWI76_RS11755 are separated by 40 nucleotidesBWI76_RS11755 and BWI76_RS11760 are separated by 97 nucleotidesBWI76_RS11760 and BWI76_RS11765 are separated by 74 nucleotides BWI76_RS11745: BWI76_RS11745 - 6-phospho-beta-glucosidase, at 2,470,400 to 2,471,746 _RS11745 BWI76_RS11750: BWI76_RS11750 - chitooligosaccharide deacetylase, at 2,471,759 to 2,472,517 _RS11750 BWI76_RS11755: BWI76_RS11755 - catalase HPII, at 2,472,558 to 2,474,816 _RS11755 BWI76_RS11760: BWI76_RS11760 - cell division protein, at 2,474,914 to 2,475,252 _RS11760 BWI76_RS11765: BWI76_RS11765 - bifunctional transporter/kinase, at 2,475,327 to 2,476,718 _RS11765 Position (kb) 2472 2473 2474 2475Strain fitness (log2 ratio) -2 -1 0 1at 2471.580 kb on + strand, within BWI76_RS11745at 2471.691 kb on + strandat 2471.713 kb on - strandat 2471.784 kb on - strandat 2471.861 kb on - strand, within BWI76_RS11750at 2472.165 kb on - strand, within BWI76_RS11750at 2472.333 kb on + strand, within BWI76_RS11750at 2472.443 kb on - strandat 2472.520 kb on - strandat 2472.994 kb on + strand, within BWI76_RS11755at 2473.066 kb on + strand, within BWI76_RS11755at 2473.110 kb on - strand, within BWI76_RS11755at 2473.303 kb on + strand, within BWI76_RS11755at 2473.370 kb on + strand, within BWI76_RS11755at 2473.437 kb on - strand, within BWI76_RS11755at 2474.794 kb on + strandat 2475.122 kb on - strand, within BWI76_RS11760at 2475.325 kb on + strandat 2475.325 kb on + strandat 2475.455 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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2,471,580 + BWI76_RS11745 0.88 +0.0
2,471,691 + -0.5
2,471,713 - -2.3
2,471,784 - +0.1
2,471,861 - BWI76_RS11750 0.13 +0.6
2,472,165 - BWI76_RS11750 0.53 -0.0
2,472,333 + BWI76_RS11750 0.76 -1.0
2,472,443 - +1.0
2,472,520 - -0.4
2,472,994 + BWI76_RS11755 0.19 -0.4
2,473,066 + BWI76_RS11755 0.22 -1.0
2,473,110 - BWI76_RS11755 0.24 -0.6
2,473,303 + BWI76_RS11755 0.33 -2.1
2,473,370 + BWI76_RS11755 0.36 +0.2
2,473,437 - BWI76_RS11755 0.39 -1.6
2,474,794 + +0.4
2,475,122 - BWI76_RS11760 0.61 -0.8
2,475,325 + -1.3
2,475,325 + +0.3
2,475,455 - -0.6

Or see this region's nucleotide sequence