Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11715 and BWI76_RS11720 are separated by 230 nucleotides BWI76_RS11720 and BWI76_RS11725 are separated by 285 nucleotides BWI76_RS11725 and BWI76_RS11730 are separated by 168 nucleotides
BWI76_RS11715: BWI76_RS11715 - NAD(+) synthetase, at 2,465,515 to 2,466,342
_RS11715
BWI76_RS11720: BWI76_RS11720 - transcriptional regulator, at 2,466,573 to 2,466,911
_RS11720
BWI76_RS11725: BWI76_RS11725 - PTS sugar transporter subunit IIB, at 2,467,197 to 2,467,517
_RS11725
BWI76_RS11730: BWI76_RS11730 - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 2,467,686 to 2,469,044
_RS11730
Position (kb)
2466
2467 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2466.391 kb on - strand at 2466.391 kb on - strand at 2466.391 kb on - strand at 2466.402 kb on - strand at 2466.451 kb on + strand at 2466.583 kb on - strand at 2466.620 kb on - strand, within BWI76_RS11720 at 2466.620 kb on - strand, within BWI76_RS11720 at 2466.620 kb on - strand, within BWI76_RS11720 at 2466.626 kb on - strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.750 kb on + strand, within BWI76_RS11720 at 2466.894 kb on - strand at 2466.894 kb on - strand at 2466.981 kb on - strand at 2466.983 kb on - strand at 2467.031 kb on - strand at 2467.076 kb on + strand at 2467.088 kb on + strand at 2467.090 kb on + strand at 2467.140 kb on + strand at 2467.140 kb on + strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.174 kb on - strand at 2467.215 kb on + strand at 2467.220 kb on + strand at 2467.220 kb on + strand at 2467.220 kb on + strand at 2467.225 kb on + strand at 2467.228 kb on - strand at 2467.228 kb on - strand at 2467.228 kb on - strand at 2467.235 kb on + strand, within BWI76_RS11725 at 2467.236 kb on - strand, within BWI76_RS11725 at 2467.238 kb on - strand, within BWI76_RS11725 at 2467.243 kb on - strand, within BWI76_RS11725 at 2467.243 kb on - strand, within BWI76_RS11725 at 2467.246 kb on - strand, within BWI76_RS11725 at 2467.282 kb on + strand, within BWI76_RS11725 at 2467.298 kb on - strand, within BWI76_RS11725 at 2467.319 kb on + strand, within BWI76_RS11725 at 2467.327 kb on - strand, within BWI76_RS11725 at 2467.390 kb on + strand, within BWI76_RS11725 at 2467.440 kb on + strand, within BWI76_RS11725 at 2467.445 kb on + strand, within BWI76_RS11725 at 2467.448 kb on + strand, within BWI76_RS11725 at 2467.572 kb on + strand at 2467.575 kb on + strand at 2467.607 kb on + strand at 2467.636 kb on + strand at 2467.675 kb on + strand at 2467.754 kb on - strand at 2467.765 kb on - strand at 2467.809 kb on - strand at 2467.813 kb on - strand at 2467.884 kb on + strand, within BWI76_RS11730 at 2467.884 kb on + strand, within BWI76_RS11730 at 2467.900 kb on + strand, within BWI76_RS11730 at 2467.900 kb on + strand, within BWI76_RS11730 at 2467.903 kb on - strand, within BWI76_RS11730 at 2467.910 kb on + strand, within BWI76_RS11730 at 2467.910 kb on + strand, within BWI76_RS11730
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 2,466,391 - +0.9 2,466,391 - -0.1 2,466,391 - +0.1 2,466,402 - -1.7 2,466,451 + +0.9 2,466,583 - +0.6 2,466,620 - BWI76_RS11720 0.14 +1.4 2,466,620 - BWI76_RS11720 0.14 -3.7 2,466,620 - BWI76_RS11720 0.14 -1.8 2,466,626 - BWI76_RS11720 0.16 +1.2 2,466,639 + BWI76_RS11720 0.19 +0.4 2,466,639 + BWI76_RS11720 0.19 +0.4 2,466,639 + BWI76_RS11720 0.19 -1.6 2,466,639 + BWI76_RS11720 0.19 -0.6 2,466,639 + BWI76_RS11720 0.19 +0.6 2,466,639 + BWI76_RS11720 0.19 +0.5 2,466,639 + BWI76_RS11720 0.19 +0.6 2,466,639 + BWI76_RS11720 0.19 +0.3 2,466,647 - BWI76_RS11720 0.22 -0.7 2,466,647 - BWI76_RS11720 0.22 +1.1 2,466,647 - BWI76_RS11720 0.22 -1.3 2,466,647 - BWI76_RS11720 0.22 -0.9 2,466,647 - BWI76_RS11720 0.22 -3.1 2,466,647 - BWI76_RS11720 0.22 -0.6 2,466,647 - BWI76_RS11720 0.22 +0.5 2,466,647 - BWI76_RS11720 0.22 -1.9 2,466,647 - BWI76_RS11720 0.22 -0.6 2,466,647 - BWI76_RS11720 0.22 +0.2 2,466,647 - BWI76_RS11720 0.22 +0.7 2,466,647 - BWI76_RS11720 0.22 -1.2 2,466,647 - BWI76_RS11720 0.22 -0.7 2,466,750 + BWI76_RS11720 0.52 +0.0 2,466,894 - +1.7 2,466,894 - +0.8 2,466,981 - +0.3 2,466,983 - -1.0 2,467,031 - -1.0 2,467,076 + -0.2 2,467,088 + -1.9 2,467,090 + -0.3 2,467,140 + -0.6 2,467,140 + +1.3 2,467,148 - +0.3 2,467,148 - -0.7 2,467,148 - -1.6 2,467,148 - +2.5 2,467,148 - -1.4 2,467,148 - +1.6 2,467,174 - +0.0 2,467,215 + +0.9 2,467,220 + -0.1 2,467,220 + -1.6 2,467,220 + +1.5 2,467,225 + +1.3 2,467,228 - -0.6 2,467,228 - -1.3 2,467,228 - -2.5 2,467,235 + BWI76_RS11725 0.12 -0.4 2,467,236 - BWI76_RS11725 0.12 +1.3 2,467,238 - BWI76_RS11725 0.13 +1.1 2,467,243 - BWI76_RS11725 0.14 +2.4 2,467,243 - BWI76_RS11725 0.14 -1.5 2,467,246 - BWI76_RS11725 0.15 +0.7 2,467,282 + BWI76_RS11725 0.26 -2.5 2,467,298 - BWI76_RS11725 0.31 +3.1 2,467,319 + BWI76_RS11725 0.38 -1.5 2,467,327 - BWI76_RS11725 0.40 -1.3 2,467,390 + BWI76_RS11725 0.60 -1.6 2,467,440 + BWI76_RS11725 0.76 -1.2 2,467,445 + BWI76_RS11725 0.77 -2.2 2,467,448 + BWI76_RS11725 0.78 -0.4 2,467,572 + -2.0 2,467,575 + -0.4 2,467,607 + -1.2 2,467,636 + -0.9 2,467,675 + +1.0 2,467,754 - +1.6 2,467,765 - +1.0 2,467,809 - -0.3 2,467,813 - +0.0 2,467,884 + BWI76_RS11730 0.15 -1.3 2,467,884 + BWI76_RS11730 0.15 -1.4 2,467,900 + BWI76_RS11730 0.16 -3.2 2,467,900 + BWI76_RS11730 0.16 +0.6 2,467,903 - BWI76_RS11730 0.16 -1.8 2,467,910 + BWI76_RS11730 0.16 +0.4 2,467,910 + BWI76_RS11730 0.16 +0.6
Or see this region's nucleotide sequence