Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08950 and BWI76_RS08955 are separated by 95 nucleotides BWI76_RS08955 and BWI76_RS08960 overlap by 6 nucleotides
BWI76_RS08950: BWI76_RS08950 - Asp/Glu/hydantoin racemase, at 1,885,943 to 1,886,557
_RS08950
BWI76_RS08955: BWI76_RS08955 - 23S rRNA (adenine(1618)-N(6))-methyltransferase, at 1,886,653 to 1,887,567
_RS08955
BWI76_RS08960: BWI76_RS08960 - mechanosensitive channel protein, at 1,887,562 to 1,889,772
_RS08960
Position (kb)
1886
1887
1888 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1885.862 kb on + strand at 1886.031 kb on - strand, within BWI76_RS08950 at 1886.102 kb on - strand, within BWI76_RS08950 at 1886.131 kb on - strand, within BWI76_RS08950 at 1886.365 kb on + strand, within BWI76_RS08950 at 1886.439 kb on + strand, within BWI76_RS08950 at 1886.682 kb on + strand at 1886.710 kb on - strand at 1886.838 kb on + strand, within BWI76_RS08955 at 1886.856 kb on - strand, within BWI76_RS08955 at 1887.157 kb on - strand, within BWI76_RS08955 at 1887.196 kb on + strand, within BWI76_RS08955 at 1887.209 kb on - strand, within BWI76_RS08955 at 1887.274 kb on - strand, within BWI76_RS08955 at 1887.274 kb on - strand, within BWI76_RS08955 at 1887.274 kb on - strand, within BWI76_RS08955 at 1887.446 kb on - strand, within BWI76_RS08955 at 1888.058 kb on + strand, within BWI76_RS08960 at 1888.343 kb on - strand, within BWI76_RS08960 at 1888.343 kb on - strand, within BWI76_RS08960
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 1,885,862 + +0.2 1,886,031 - BWI76_RS08950 0.14 +1.1 1,886,102 - BWI76_RS08950 0.26 +0.2 1,886,131 - BWI76_RS08950 0.31 -1.0 1,886,365 + BWI76_RS08950 0.69 -0.5 1,886,439 + BWI76_RS08950 0.81 +0.1 1,886,682 + -1.7 1,886,710 - +1.5 1,886,838 + BWI76_RS08955 0.20 -2.3 1,886,856 - BWI76_RS08955 0.22 -0.9 1,887,157 - BWI76_RS08955 0.55 -0.4 1,887,196 + BWI76_RS08955 0.59 -1.3 1,887,209 - BWI76_RS08955 0.61 -3.3 1,887,274 - BWI76_RS08955 0.68 -0.7 1,887,274 - BWI76_RS08955 0.68 -3.4 1,887,274 - BWI76_RS08955 0.68 +2.0 1,887,446 - BWI76_RS08955 0.87 +0.3 1,888,058 + BWI76_RS08960 0.22 +1.1 1,888,343 - BWI76_RS08960 0.35 -0.5 1,888,343 - BWI76_RS08960 0.35 -1.2
Or see this region's nucleotide sequence