Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06870

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06865 and BWI76_RS06870 are separated by 115 nucleotidesBWI76_RS06870 and BWI76_RS06875 are separated by 201 nucleotides BWI76_RS06865: BWI76_RS06865 - bifunctional UDP-sugar hydrolase/5'-nucleotidase, at 1,441,588 to 1,443,240 _RS06865 BWI76_RS06870: BWI76_RS06870 - aminoacyl-tRNA deacylase, at 1,443,356 to 1,443,835 _RS06870 BWI76_RS06875: BWI76_RS06875 - conjugal transfer protein TraB, at 1,444,037 to 1,444,831 _RS06875 Position (kb) 1443 1444Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1442.695 kb on + strand, within BWI76_RS06865at 1442.863 kb on + strand, within BWI76_RS06865at 1442.886 kb on + strand, within BWI76_RS06865at 1442.943 kb on + strand, within BWI76_RS06865at 1443.032 kb on - strand, within BWI76_RS06865at 1443.048 kb on + strand, within BWI76_RS06865at 1443.169 kb on - strandat 1443.241 kb on + strandat 1443.249 kb on - strandat 1443.266 kb on + strandat 1443.478 kb on - strand, within BWI76_RS06870at 1443.714 kb on + strand, within BWI76_RS06870at 1443.721 kb on + strand, within BWI76_RS06870at 1443.864 kb on - strandat 1443.881 kb on - strandat 1443.917 kb on + strandat 1444.180 kb on + strand, within BWI76_RS06875at 1444.180 kb on + strand, within BWI76_RS06875at 1444.188 kb on - strand, within BWI76_RS06875at 1444.188 kb on - strand, within BWI76_RS06875at 1444.188 kb on - strand, within BWI76_RS06875at 1444.188 kb on - strand, within BWI76_RS06875at 1444.188 kb on - strand, within BWI76_RS06875at 1444.279 kb on + strand, within BWI76_RS06875at 1444.373 kb on + strand, within BWI76_RS06875at 1444.381 kb on - strand, within BWI76_RS06875at 1444.392 kb on + strand, within BWI76_RS06875at 1444.567 kb on - strand, within BWI76_RS06875at 1444.716 kb on - strand, within BWI76_RS06875at 1444.726 kb on + strand, within BWI76_RS06875at 1444.726 kb on + strand, within BWI76_RS06875at 1444.734 kb on - strand, within BWI76_RS06875at 1444.740 kb on + strand, within BWI76_RS06875at 1444.758 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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1,442,695 + BWI76_RS06865 0.67 -0.9
1,442,863 + BWI76_RS06865 0.77 -1.2
1,442,886 + BWI76_RS06865 0.79 +0.8
1,442,943 + BWI76_RS06865 0.82 +0.2
1,443,032 - BWI76_RS06865 0.87 +1.9
1,443,048 + BWI76_RS06865 0.88 +0.5
1,443,169 - -0.4
1,443,241 + -2.8
1,443,249 - +2.3
1,443,266 + -1.4
1,443,478 - BWI76_RS06870 0.25 +1.8
1,443,714 + BWI76_RS06870 0.75 +0.7
1,443,721 + BWI76_RS06870 0.76 -0.4
1,443,864 - +1.6
1,443,881 - -0.3
1,443,917 + +0.6
1,444,180 + BWI76_RS06875 0.18 -3.1
1,444,180 + BWI76_RS06875 0.18 -2.7
1,444,188 - BWI76_RS06875 0.19 +0.2
1,444,188 - BWI76_RS06875 0.19 +0.5
1,444,188 - BWI76_RS06875 0.19 +0.9
1,444,188 - BWI76_RS06875 0.19 -0.2
1,444,188 - BWI76_RS06875 0.19 -2.5
1,444,279 + BWI76_RS06875 0.30 +2.1
1,444,373 + BWI76_RS06875 0.42 -3.0
1,444,381 - BWI76_RS06875 0.43 +0.4
1,444,392 + BWI76_RS06875 0.45 +1.9
1,444,567 - BWI76_RS06875 0.67 -0.3
1,444,716 - BWI76_RS06875 0.85 -0.2
1,444,726 + BWI76_RS06875 0.87 -2.5
1,444,726 + BWI76_RS06875 0.87 -3.9
1,444,734 - BWI76_RS06875 0.88 +1.9
1,444,740 + BWI76_RS06875 0.88 +1.3
1,444,758 - -1.1

Or see this region's nucleotide sequence