Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06455 and H281DRAFT_06456 overlap by 102 nucleotides H281DRAFT_06456 and H281DRAFT_06457 are separated by 587 nucleotides H281DRAFT_06457 and H281DRAFT_06458 are separated by 207 nucleotides H281DRAFT_06458 and H281DRAFT_06459 overlap by 4 nucleotides
H281DRAFT_06455: H281DRAFT_06455 - transcriptional regulator, TraR/DksA family, at 64,970 to 65,350
_06455
H281DRAFT_06456: H281DRAFT_06456 - hypothetical protein, at 65,249 to 65,656
_06456
H281DRAFT_06457: H281DRAFT_06457 - hypothetical protein, at 66,244 to 66,456
_06457
H281DRAFT_06458: H281DRAFT_06458 - hypothetical protein, at 66,664 to 67,173
_06458
H281DRAFT_06459: H281DRAFT_06459 - flagellar motor switch protein FliG, at 67,170 to 68,165
_06459
Position (kb) 66
67 Strain fitness (log2 ratio) -1
0
1
2
3 at 65.258 kb on - strand at 65.258 kb on - strand at 65.490 kb on + strand, within H281DRAFT_06456 at 65.491 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.500 kb on + strand, within H281DRAFT_06456 at 65.587 kb on - strand, within H281DRAFT_06456 at 65.688 kb on + strand at 65.734 kb on + strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.928 kb on - strand at 65.953 kb on + strand at 66.154 kb on - strand at 66.212 kb on + strand at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.372 kb on - strand, within H281DRAFT_06457 at 66.372 kb on - strand, within H281DRAFT_06457 at 66.404 kb on + strand, within H281DRAFT_06457 at 66.441 kb on + strand at 66.442 kb on - strand at 66.484 kb on + strand at 66.485 kb on - strand at 66.485 kb on - strand at 66.622 kb on + strand at 66.623 kb on - strand at 66.742 kb on + strand, within H281DRAFT_06458 at 67.006 kb on + strand, within H281DRAFT_06458 at 67.008 kb on + strand, within H281DRAFT_06458 at 67.008 kb on + strand, within H281DRAFT_06458 at 67.008 kb on + strand, within H281DRAFT_06458 at 67.008 kb on + strand, within H281DRAFT_06458 at 67.009 kb on - strand, within H281DRAFT_06458 at 67.009 kb on - strand, within H281DRAFT_06458 at 67.009 kb on - strand, within H281DRAFT_06458 at 67.009 kb on - strand, within H281DRAFT_06458
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 65,258 - -1.5 65,258 - -1.4 65,490 + H281DRAFT_06456 0.59 -0.6 65,491 - H281DRAFT_06456 0.59 -0.5 65,498 - H281DRAFT_06456 0.61 +0.5 65,498 - H281DRAFT_06456 0.61 -0.2 65,500 + H281DRAFT_06456 0.62 +1.0 65,587 - H281DRAFT_06456 0.83 +0.4 65,688 + -0.1 65,734 + -0.4 65,806 - +0.1 65,806 - +1.6 65,806 - +0.5 65,928 - +0.4 65,953 + +0.4 66,154 - +0.2 66,212 + +0.4 66,371 + H281DRAFT_06457 0.60 -0.2 66,371 + H281DRAFT_06457 0.60 +1.7 66,371 + H281DRAFT_06457 0.60 +0.5 66,371 + H281DRAFT_06457 0.60 -0.5 66,371 + H281DRAFT_06457 0.60 +0.9 66,371 + H281DRAFT_06457 0.60 +0.7 66,372 - H281DRAFT_06457 0.60 +1.0 66,372 - H281DRAFT_06457 0.60 +0.4 66,404 + H281DRAFT_06457 0.75 -1.6 66,441 + -1.0 66,442 - -0.2 66,484 + +0.5 66,485 - -0.3 66,485 - +3.0 66,622 + -0.5 66,623 - +0.2 66,742 + H281DRAFT_06458 0.15 +0.4 67,006 + H281DRAFT_06458 0.67 +0.3 67,008 + H281DRAFT_06458 0.67 +0.8 67,008 + H281DRAFT_06458 0.67 +0.3 67,008 + H281DRAFT_06458 0.67 -0.2 67,008 + H281DRAFT_06458 0.67 +0.4 67,009 - H281DRAFT_06458 0.68 +0.9 67,009 - H281DRAFT_06458 0.68 +0.2 67,009 - H281DRAFT_06458 0.68 +0.7 67,009 - H281DRAFT_06458 0.68 +1.2
Or see this region's nucleotide sequence