Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06454 and H281DRAFT_06455 are separated by 159 nucleotides H281DRAFT_06455 and H281DRAFT_06456 overlap by 102 nucleotides H281DRAFT_06456 and H281DRAFT_06457 are separated by 587 nucleotides
H281DRAFT_06454: H281DRAFT_06454 - NAD(P)H-nitrite reductase, at 63,281 to 64,810
_06454
H281DRAFT_06455: H281DRAFT_06455 - transcriptional regulator, TraR/DksA family, at 64,970 to 65,350
_06455
H281DRAFT_06456: H281DRAFT_06456 - hypothetical protein, at 65,249 to 65,656
_06456
H281DRAFT_06457: H281DRAFT_06457 - hypothetical protein, at 66,244 to 66,456
_06457
Position (kb) 64
65
66 Strain fitness (log2 ratio) -1
0
1 at 64.075 kb on + strand, within H281DRAFT_06454 at 64.231 kb on + strand, within H281DRAFT_06454 at 64.231 kb on + strand, within H281DRAFT_06454 at 64.237 kb on - strand, within H281DRAFT_06454 at 64.381 kb on - strand, within H281DRAFT_06454 at 64.417 kb on - strand, within H281DRAFT_06454 at 64.493 kb on - strand, within H281DRAFT_06454 at 64.502 kb on + strand, within H281DRAFT_06454 at 64.620 kb on - strand, within H281DRAFT_06454 at 64.620 kb on - strand, within H281DRAFT_06454 at 64.622 kb on - strand, within H281DRAFT_06454 at 64.638 kb on - strand, within H281DRAFT_06454 at 64.932 kb on - strand at 64.976 kb on - strand at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.240 kb on + strand, within H281DRAFT_06455 at 65.241 kb on - strand, within H281DRAFT_06455 at 65.241 kb on - strand, within H281DRAFT_06455 at 65.258 kb on - strand at 65.258 kb on - strand at 65.490 kb on + strand, within H281DRAFT_06456 at 65.491 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.500 kb on + strand, within H281DRAFT_06456 at 65.587 kb on - strand, within H281DRAFT_06456 at 65.688 kb on + strand at 65.734 kb on + strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.928 kb on - strand at 65.953 kb on + strand at 66.154 kb on - strand at 66.212 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 64,075 + H281DRAFT_06454 0.52 +0.4 64,231 + H281DRAFT_06454 0.62 +0.7 64,231 + H281DRAFT_06454 0.62 +0.3 64,237 - H281DRAFT_06454 0.62 -0.6 64,381 - H281DRAFT_06454 0.72 +0.1 64,417 - H281DRAFT_06454 0.74 +0.6 64,493 - H281DRAFT_06454 0.79 -0.6 64,502 + H281DRAFT_06454 0.80 +1.6 64,620 - H281DRAFT_06454 0.88 +0.1 64,620 - H281DRAFT_06454 0.88 +0.2 64,622 - H281DRAFT_06454 0.88 +0.6 64,638 - H281DRAFT_06454 0.89 -1.2 64,932 - +0.1 64,976 - -0.4 65,153 + H281DRAFT_06455 0.48 +0.4 65,153 + H281DRAFT_06455 0.48 +1.0 65,153 + H281DRAFT_06455 0.48 -1.7 65,153 + H281DRAFT_06455 0.48 -0.2 65,154 - H281DRAFT_06455 0.48 +0.9 65,154 - H281DRAFT_06455 0.48 -0.5 65,154 - H281DRAFT_06455 0.48 +1.0 65,154 - H281DRAFT_06455 0.48 -0.1 65,154 - H281DRAFT_06455 0.48 -1.0 65,154 - H281DRAFT_06455 0.48 +0.9 65,240 + H281DRAFT_06455 0.71 +0.6 65,241 - H281DRAFT_06455 0.71 +0.9 65,241 - H281DRAFT_06455 0.71 +0.6 65,258 - -1.5 65,258 - -1.4 65,490 + H281DRAFT_06456 0.59 -0.6 65,491 - H281DRAFT_06456 0.59 -0.5 65,498 - H281DRAFT_06456 0.61 +0.5 65,498 - H281DRAFT_06456 0.61 -0.2 65,500 + H281DRAFT_06456 0.62 +1.0 65,587 - H281DRAFT_06456 0.83 +0.4 65,688 + -0.1 65,734 + -0.4 65,806 - +0.1 65,806 - +1.6 65,806 - +0.5 65,928 - +0.4 65,953 + +0.4 66,154 - +0.2 66,212 + +0.4
Or see this region's nucleotide sequence