Experiment: m.b. Cisplatin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_262p00830 and PGA1_262p00840 are separated by 91 nucleotides PGA1_262p00840 and PGA1_262p00850 are separated by 130 nucleotides
PGA1_262p00830: PGA1_262p00830 - hypothetical protein, at 92,033 to 93,094
_262p00830
PGA1_262p00840: PGA1_262p00840 - hypothetical protein, at 93,186 to 94,511
_262p00840
PGA1_262p00850: PGA1_262p00850 - putative sodium dependent symporter, at 94,642 to 96,099
_262p00850
Position (kb) 93
94
95 Strain fitness (log2 ratio) -2
-1
0
1 at 92.236 kb on - strand, within PGA1_262p00830 at 92.374 kb on + strand, within PGA1_262p00830 at 92.616 kb on - strand, within PGA1_262p00830 at 92.667 kb on - strand, within PGA1_262p00830 at 92.680 kb on + strand, within PGA1_262p00830 at 92.689 kb on - strand, within PGA1_262p00830 at 92.713 kb on + strand, within PGA1_262p00830 at 92.796 kb on - strand, within PGA1_262p00830 at 92.935 kb on + strand, within PGA1_262p00830 at 92.943 kb on - strand, within PGA1_262p00830 at 93.240 kb on + strand at 93.411 kb on + strand, within PGA1_262p00840 at 93.513 kb on + strand, within PGA1_262p00840 at 93.582 kb on + strand, within PGA1_262p00840 at 93.588 kb on + strand, within PGA1_262p00840 at 93.646 kb on + strand, within PGA1_262p00840 at 93.654 kb on - strand, within PGA1_262p00840 at 93.662 kb on - strand, within PGA1_262p00840 at 93.680 kb on - strand, within PGA1_262p00840 at 93.709 kb on + strand, within PGA1_262p00840 at 93.922 kb on - strand, within PGA1_262p00840 at 93.924 kb on + strand, within PGA1_262p00840 at 93.929 kb on + strand, within PGA1_262p00840 at 93.982 kb on - strand, within PGA1_262p00840 at 94.153 kb on + strand, within PGA1_262p00840 at 94.457 kb on - strand at 94.470 kb on - strand at 94.492 kb on + strand at 94.572 kb on + strand at 95.149 kb on + strand, within PGA1_262p00850
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml remove 92,236 - PGA1_262p00830 0.19 -0.2 92,374 + PGA1_262p00830 0.32 -0.2 92,616 - PGA1_262p00830 0.55 +1.2 92,667 - PGA1_262p00830 0.60 +0.4 92,680 + PGA1_262p00830 0.61 -2.0 92,689 - PGA1_262p00830 0.62 -0.6 92,713 + PGA1_262p00830 0.64 -1.4 92,796 - PGA1_262p00830 0.72 -0.2 92,935 + PGA1_262p00830 0.85 -2.3 92,943 - PGA1_262p00830 0.86 -1.5 93,240 + +0.0 93,411 + PGA1_262p00840 0.17 -1.0 93,513 + PGA1_262p00840 0.25 +0.6 93,582 + PGA1_262p00840 0.30 +1.0 93,588 + PGA1_262p00840 0.30 +0.8 93,646 + PGA1_262p00840 0.35 +0.8 93,654 - PGA1_262p00840 0.35 +0.6 93,662 - PGA1_262p00840 0.36 -1.2 93,680 - PGA1_262p00840 0.37 -0.1 93,709 + PGA1_262p00840 0.39 +0.2 93,922 - PGA1_262p00840 0.56 +1.0 93,924 + PGA1_262p00840 0.56 -0.2 93,929 + PGA1_262p00840 0.56 -0.1 93,982 - PGA1_262p00840 0.60 -0.2 94,153 + PGA1_262p00840 0.73 +1.0 94,457 - -0.5 94,470 - -0.1 94,492 + -2.1 94,572 + -1.5 95,149 + PGA1_262p00850 0.35 +0.4
Or see this region's nucleotide sequence