Strain Fitness in Marinobacter adhaerens HP15 around HP15_3319

Experiment: L-Malic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3318 and HP15_3319 are separated by 95 nucleotidesHP15_3319 and HP15_3320 are separated by 41 nucleotides HP15_3318: HP15_3318 - phosphomannomutase, at 3,478,636 to 3,481,278 _3318 HP15_3319: HP15_3319 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut, at 3,481,374 to 3,481,835 _3319 HP15_3320: HP15_3320 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase, at 3,481,877 to 3,483,076 _3320 Position (kb) 3481 3482Strain fitness (log2 ratio) -2 -1 0 1at 3480.389 kb on + strand, within HP15_3318at 3480.499 kb on - strand, within HP15_3318at 3480.501 kb on - strand, within HP15_3318at 3480.501 kb on - strand, within HP15_3318at 3480.502 kb on - strand, within HP15_3318at 3480.506 kb on + strand, within HP15_3318at 3480.514 kb on - strand, within HP15_3318at 3480.593 kb on + strand, within HP15_3318at 3480.593 kb on + strand, within HP15_3318at 3480.601 kb on - strand, within HP15_3318at 3480.647 kb on + strand, within HP15_3318at 3480.793 kb on - strand, within HP15_3318at 3480.964 kb on + strand, within HP15_3318at 3480.991 kb on + strand, within HP15_3318at 3481.188 kb on + strandat 3481.280 kb on - strandat 3481.340 kb on - strandat 3481.340 kb on - strandat 3481.340 kb on - strandat 3481.340 kb on - strandat 3481.351 kb on + strandat 3481.841 kb on - strandat 3481.849 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic
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3,480,389 + HP15_3318 0.66 -0.4
3,480,499 - HP15_3318 0.70 +1.5
3,480,501 - HP15_3318 0.71 +0.8
3,480,501 - HP15_3318 0.71 +0.6
3,480,502 - HP15_3318 0.71 -1.0
3,480,506 + HP15_3318 0.71 +0.7
3,480,514 - HP15_3318 0.71 +0.3
3,480,593 + HP15_3318 0.74 -1.9
3,480,593 + HP15_3318 0.74 -0.9
3,480,601 - HP15_3318 0.74 +0.7
3,480,647 + HP15_3318 0.76 -0.9
3,480,793 - HP15_3318 0.82 -0.1
3,480,964 + HP15_3318 0.88 -0.6
3,480,991 + HP15_3318 0.89 -0.4
3,481,188 + -1.5
3,481,280 - +0.5
3,481,340 - -0.3
3,481,340 - -0.3
3,481,340 - -0.2
3,481,340 - +1.2
3,481,351 + +1.0
3,481,841 - -0.5
3,481,849 - +1.5

Or see this region's nucleotide sequence