Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14770
Experiment: m.b. Cisplatin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cisplatin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,528,957 | - | PGA1_c14760 | 0.41 | -0.3 | |
1,529,660 | + | -3.2 | |||
1,529,716 | + | -0.7 | |||
1,529,753 | - | -1.6 | |||
1,529,805 | + | -0.0 | |||
1,529,898 | + | -0.8 | |||
1,530,026 | + | PGA1_c14770 | 0.15 | -0.2 | |
1,530,026 | + | PGA1_c14770 | 0.15 | -0.3 | |
1,530,034 | - | PGA1_c14770 | 0.16 | +1.8 | |
1,530,034 | - | PGA1_c14770 | 0.16 | +0.4 | |
1,530,074 | + | PGA1_c14770 | 0.20 | +0.4 | |
1,530,358 | + | PGA1_c14770 | 0.48 | +0.3 | |
1,530,363 | + | PGA1_c14770 | 0.48 | +0.7 | |
1,530,371 | - | PGA1_c14770 | 0.49 | +0.7 | |
1,530,443 | + | PGA1_c14770 | 0.56 | -0.6 | |
1,530,451 | - | PGA1_c14770 | 0.57 | +2.4 | |
1,530,487 | - | PGA1_c14770 | 0.60 | -1.6 | |
1,530,532 | - | PGA1_c14770 | 0.65 | +0.5 | |
1,530,661 | - | PGA1_c14770 | 0.78 | +0.6 | |
1,530,731 | - | PGA1_c14770 | 0.85 | +0.2 | |
1,530,785 | - | PGA1_c14770 | 0.90 | +0.5 | |
1,530,892 | + | +0.8 |
Or see this region's nucleotide sequence