Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27710 and BWI76_RS27715 are separated by 24 nucleotides BWI76_RS27715 and BWI76_RS27720 are separated by 249 nucleotides
BWI76_RS27710: BWI76_RS27710 - N-acetylmuramic acid 6-phosphate etherase, at 5,751,207 to 5,752,109
_RS27710
BWI76_RS27715: BWI76_RS27715 - PTS N-acetylmuramic acid transporter subunits IIBC, at 5,752,134 to 5,753,567
_RS27715
BWI76_RS27720: BWI76_RS27720 - carboxylate/amino acid/amine transporter, at 5,753,817 to 5,754,719
_RS27720
Position (kb)
5752
5753
5754 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5751.332 kb on - strand, within BWI76_RS27710 at 5751.345 kb on - strand, within BWI76_RS27710 at 5751.574 kb on + strand, within BWI76_RS27710 at 5751.612 kb on + strand, within BWI76_RS27710 at 5751.666 kb on + strand, within BWI76_RS27710 at 5751.800 kb on + strand, within BWI76_RS27710 at 5751.802 kb on - strand, within BWI76_RS27710 at 5751.856 kb on + strand, within BWI76_RS27710 at 5751.866 kb on + strand, within BWI76_RS27710 at 5751.867 kb on + strand, within BWI76_RS27710 at 5751.867 kb on + strand, within BWI76_RS27710 at 5751.867 kb on + strand, within BWI76_RS27710 at 5751.874 kb on - strand, within BWI76_RS27710 at 5751.875 kb on - strand, within BWI76_RS27710 at 5752.092 kb on + strand at 5752.100 kb on - strand at 5752.102 kb on + strand at 5752.105 kb on - strand at 5752.288 kb on - strand, within BWI76_RS27715 at 5752.327 kb on - strand, within BWI76_RS27715 at 5752.549 kb on - strand, within BWI76_RS27715 at 5752.632 kb on - strand, within BWI76_RS27715 at 5752.692 kb on + strand, within BWI76_RS27715 at 5752.736 kb on + strand, within BWI76_RS27715 at 5753.007 kb on - strand, within BWI76_RS27715 at 5753.018 kb on + strand, within BWI76_RS27715 at 5753.046 kb on - strand, within BWI76_RS27715 at 5753.096 kb on - strand, within BWI76_RS27715 at 5753.110 kb on + strand, within BWI76_RS27715 at 5753.120 kb on + strand, within BWI76_RS27715 at 5753.142 kb on - strand, within BWI76_RS27715 at 5753.180 kb on + strand, within BWI76_RS27715 at 5753.193 kb on - strand, within BWI76_RS27715 at 5753.531 kb on - strand at 5753.531 kb on - strand at 5753.681 kb on + strand at 5753.716 kb on + strand at 5753.724 kb on - strand at 5753.724 kb on - strand at 5753.798 kb on + strand at 5753.857 kb on + strand at 5753.883 kb on - strand at 5753.943 kb on + strand, within BWI76_RS27720 at 5753.992 kb on + strand, within BWI76_RS27720 at 5754.116 kb on + strand, within BWI76_RS27720 at 5754.196 kb on - strand, within BWI76_RS27720 at 5754.288 kb on + strand, within BWI76_RS27720 at 5754.293 kb on + strand, within BWI76_RS27720 at 5754.293 kb on + strand, within BWI76_RS27720 at 5754.296 kb on - strand, within BWI76_RS27720 at 5754.301 kb on - strand, within BWI76_RS27720 at 5754.301 kb on - strand, within BWI76_RS27720 at 5754.457 kb on + strand, within BWI76_RS27720 at 5754.502 kb on - strand, within BWI76_RS27720 at 5754.511 kb on + strand, within BWI76_RS27720 at 5754.519 kb on - strand, within BWI76_RS27720 at 5754.519 kb on - strand, within BWI76_RS27720
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 5,751,332 - BWI76_RS27710 0.14 -1.1 5,751,345 - BWI76_RS27710 0.15 -3.5 5,751,574 + BWI76_RS27710 0.41 +0.0 5,751,612 + BWI76_RS27710 0.45 -0.2 5,751,666 + BWI76_RS27710 0.51 +0.8 5,751,800 + BWI76_RS27710 0.66 +0.0 5,751,802 - BWI76_RS27710 0.66 +0.6 5,751,856 + BWI76_RS27710 0.72 +0.8 5,751,866 + BWI76_RS27710 0.73 -1.0 5,751,867 + BWI76_RS27710 0.73 +1.9 5,751,867 + BWI76_RS27710 0.73 +0.4 5,751,867 + BWI76_RS27710 0.73 +0.4 5,751,874 - BWI76_RS27710 0.74 +0.4 5,751,875 - BWI76_RS27710 0.74 -0.1 5,752,092 + -0.6 5,752,100 - +0.5 5,752,102 + -0.6 5,752,105 - +1.1 5,752,288 - BWI76_RS27715 0.11 -1.6 5,752,327 - BWI76_RS27715 0.13 -0.1 5,752,549 - BWI76_RS27715 0.29 -0.6 5,752,632 - BWI76_RS27715 0.35 -0.7 5,752,692 + BWI76_RS27715 0.39 +0.2 5,752,736 + BWI76_RS27715 0.42 +0.4 5,753,007 - BWI76_RS27715 0.61 +0.2 5,753,018 + BWI76_RS27715 0.62 -0.2 5,753,046 - BWI76_RS27715 0.64 -2.0 5,753,096 - BWI76_RS27715 0.67 -1.6 5,753,110 + BWI76_RS27715 0.68 -0.3 5,753,120 + BWI76_RS27715 0.69 -0.9 5,753,142 - BWI76_RS27715 0.70 +2.6 5,753,180 + BWI76_RS27715 0.73 +0.0 5,753,193 - BWI76_RS27715 0.74 -0.7 5,753,531 - +1.8 5,753,531 - -0.0 5,753,681 + +1.4 5,753,716 + -0.8 5,753,724 - -2.0 5,753,724 - +0.3 5,753,798 + -2.1 5,753,857 + +0.7 5,753,883 - +0.7 5,753,943 + BWI76_RS27720 0.14 -0.5 5,753,992 + BWI76_RS27720 0.19 -0.7 5,754,116 + BWI76_RS27720 0.33 -1.8 5,754,196 - BWI76_RS27720 0.42 +1.3 5,754,288 + BWI76_RS27720 0.52 +0.6 5,754,293 + BWI76_RS27720 0.53 -1.3 5,754,293 + BWI76_RS27720 0.53 -3.3 5,754,296 - BWI76_RS27720 0.53 +0.6 5,754,301 - BWI76_RS27720 0.54 +0.7 5,754,301 - BWI76_RS27720 0.54 -1.0 5,754,457 + BWI76_RS27720 0.71 +0.3 5,754,502 - BWI76_RS27720 0.76 +0.0 5,754,511 + BWI76_RS27720 0.77 +0.6 5,754,519 - BWI76_RS27720 0.78 +0.3 5,754,519 - BWI76_RS27720 0.78 +0.6
Or see this region's nucleotide sequence