Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19790

Experiment: D-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19785 and BWI76_RS19790 overlap by 1 nucleotidesBWI76_RS19790 and BWI76_RS19795 are separated by 1 nucleotides BWI76_RS19785: BWI76_RS19785 - microcin C ABC transporter permease YejB, at 4,137,503 to 4,138,597 _RS19785 BWI76_RS19790: BWI76_RS19790 - putative binding-protein-dependent transporter, at 4,138,597 to 4,139,622 _RS19790 BWI76_RS19795: BWI76_RS19795 - microcin C ABC transporter ATP-binding protein YejF, at 4,139,624 to 4,141,213 _RS19795 Position (kb) 4138 4139 4140Strain fitness (log2 ratio) -3 -2 -1 0 1at 4137.747 kb on + strand, within BWI76_RS19785at 4137.922 kb on - strand, within BWI76_RS19785at 4137.935 kb on + strand, within BWI76_RS19785at 4138.357 kb on - strand, within BWI76_RS19785at 4138.387 kb on - strand, within BWI76_RS19785at 4138.422 kb on - strand, within BWI76_RS19785at 4138.554 kb on + strandat 4138.562 kb on - strandat 4138.837 kb on - strand, within BWI76_RS19790at 4138.964 kb on - strand, within BWI76_RS19790at 4139.086 kb on + strand, within BWI76_RS19790at 4139.115 kb on + strand, within BWI76_RS19790at 4139.181 kb on + strand, within BWI76_RS19790at 4139.189 kb on - strand, within BWI76_RS19790at 4139.393 kb on + strand, within BWI76_RS19790at 4140.272 kb on - strand, within BWI76_RS19795at 4140.272 kb on - strand, within BWI76_RS19795at 4140.381 kb on - strand, within BWI76_RS19795at 4140.381 kb on - strand, within BWI76_RS19795at 4140.409 kb on + strand, within BWI76_RS19795at 4140.577 kb on - strand, within BWI76_RS19795

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Alanine (N)
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4,137,747 + BWI76_RS19785 0.22 -0.8
4,137,922 - BWI76_RS19785 0.38 +0.8
4,137,935 + BWI76_RS19785 0.39 +1.4
4,138,357 - BWI76_RS19785 0.78 -0.2
4,138,387 - BWI76_RS19785 0.81 -0.8
4,138,422 - BWI76_RS19785 0.84 +0.3
4,138,554 + -0.0
4,138,562 - -3.2
4,138,837 - BWI76_RS19790 0.23 -1.1
4,138,964 - BWI76_RS19790 0.36 +0.9
4,139,086 + BWI76_RS19790 0.48 -0.3
4,139,115 + BWI76_RS19790 0.50 -1.4
4,139,181 + BWI76_RS19790 0.57 +1.0
4,139,189 - BWI76_RS19790 0.58 -1.3
4,139,393 + BWI76_RS19790 0.78 -2.3
4,140,272 - BWI76_RS19795 0.41 -1.5
4,140,272 - BWI76_RS19795 0.41 +1.3
4,140,381 - BWI76_RS19795 0.48 -0.2
4,140,381 - BWI76_RS19795 0.48 -0.0
4,140,409 + BWI76_RS19795 0.49 +0.1
4,140,577 - BWI76_RS19795 0.60 +1.0

Or see this region's nucleotide sequence