Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01350 and BWI76_RS01355 are separated by 44 nucleotides BWI76_RS01355 and BWI76_RS01360 are separated by 126 nucleotides BWI76_RS01360 and BWI76_RS01365 are separated by 9 nucleotides
BWI76_RS01350: BWI76_RS01350 - NAD(P)H-flavin reductase, at 276,280 to 276,981
_RS01350
BWI76_RS01355: BWI76_RS01355 - hypothetical protein, at 277,026 to 277,337
_RS01355
BWI76_RS01360: BWI76_RS01360 - acetyl-CoA C-acyltransferase FadA, at 277,464 to 278,627
_RS01360
BWI76_RS01365: BWI76_RS01365 - multifunctional fatty acid oxidation complex subunit alpha, at 278,637 to 280,826
_RS01365
Position (kb) 277
278
279 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 276.740 kb on + strand, within BWI76_RS01350 at 277.128 kb on - strand, within BWI76_RS01355 at 277.128 kb on - strand, within BWI76_RS01355 at 277.174 kb on + strand, within BWI76_RS01355 at 277.174 kb on + strand, within BWI76_RS01355 at 277.182 kb on - strand, within BWI76_RS01355 at 277.213 kb on + strand, within BWI76_RS01355 at 277.221 kb on - strand, within BWI76_RS01355 at 277.252 kb on + strand, within BWI76_RS01355 at 277.277 kb on - strand at 277.306 kb on - strand at 277.344 kb on + strand at 277.426 kb on - strand at 277.458 kb on - strand at 277.470 kb on - strand at 277.497 kb on + strand at 277.545 kb on - strand at 277.545 kb on - strand at 277.562 kb on + strand at 277.602 kb on + strand, within BWI76_RS01360 at 277.602 kb on + strand, within BWI76_RS01360 at 277.652 kb on - strand, within BWI76_RS01360 at 277.814 kb on - strand, within BWI76_RS01360 at 277.907 kb on + strand, within BWI76_RS01360 at 277.933 kb on + strand, within BWI76_RS01360 at 278.006 kb on + strand, within BWI76_RS01360 at 278.022 kb on + strand, within BWI76_RS01360 at 278.103 kb on - strand, within BWI76_RS01360 at 278.137 kb on - strand, within BWI76_RS01360 at 278.446 kb on - strand, within BWI76_RS01360 at 278.446 kb on - strand, within BWI76_RS01360 at 278.446 kb on - strand, within BWI76_RS01360 at 278.803 kb on + strand at 278.894 kb on + strand, within BWI76_RS01365 at 278.979 kb on + strand, within BWI76_RS01365 at 279.102 kb on - strand, within BWI76_RS01365 at 279.293 kb on + strand, within BWI76_RS01365 at 279.475 kb on - strand, within BWI76_RS01365 at 279.514 kb on - strand, within BWI76_RS01365 at 279.546 kb on + strand, within BWI76_RS01365
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 276,740 + BWI76_RS01350 0.66 -3.1 277,128 - BWI76_RS01355 0.33 -1.2 277,128 - BWI76_RS01355 0.33 -0.1 277,174 + BWI76_RS01355 0.47 -1.4 277,174 + BWI76_RS01355 0.47 -0.3 277,182 - BWI76_RS01355 0.50 +1.6 277,213 + BWI76_RS01355 0.60 +0.2 277,221 - BWI76_RS01355 0.62 -0.3 277,252 + BWI76_RS01355 0.72 +1.7 277,277 - +1.1 277,306 - -0.4 277,344 + -0.3 277,426 - +0.6 277,458 - +0.9 277,470 - +0.4 277,497 + -0.7 277,545 - -2.5 277,545 - +0.3 277,562 + +1.2 277,602 + BWI76_RS01360 0.12 -2.5 277,602 + BWI76_RS01360 0.12 +0.1 277,652 - BWI76_RS01360 0.16 +0.7 277,814 - BWI76_RS01360 0.30 -0.8 277,907 + BWI76_RS01360 0.38 -0.2 277,933 + BWI76_RS01360 0.40 -0.2 278,006 + BWI76_RS01360 0.47 +1.2 278,022 + BWI76_RS01360 0.48 -0.1 278,103 - BWI76_RS01360 0.55 +0.1 278,137 - BWI76_RS01360 0.58 -2.1 278,446 - BWI76_RS01360 0.84 +0.1 278,446 - BWI76_RS01360 0.84 -1.3 278,446 - BWI76_RS01360 0.84 -1.9 278,803 + -1.0 278,894 + BWI76_RS01365 0.12 -1.9 278,979 + BWI76_RS01365 0.16 -0.7 279,102 - BWI76_RS01365 0.21 +0.6 279,293 + BWI76_RS01365 0.30 -3.7 279,475 - BWI76_RS01365 0.38 +0.5 279,514 - BWI76_RS01365 0.40 +0.4 279,546 + BWI76_RS01365 0.42 -0.5
Or see this region's nucleotide sequence