Experiment: Gallic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06166 and H281DRAFT_06167 are separated by 16 nucleotides H281DRAFT_06167 and H281DRAFT_06168 are separated by 97 nucleotides H281DRAFT_06168 and H281DRAFT_06169 are separated by 28 nucleotides
H281DRAFT_06166: H281DRAFT_06166 - Superfamily I DNA or RNA helicase, at 58,594 to 60,285
_06166
H281DRAFT_06167: H281DRAFT_06167 - hypothetical protein, at 60,302 to 61,030
_06167
H281DRAFT_06168: H281DRAFT_06168 - hypothetical protein, at 61,128 to 61,640
_06168
H281DRAFT_06169: H281DRAFT_06169 - Integral membrane protein CcmA involved in cell shape determination, at 61,669 to 62,061
_06169
Position (kb) 60
61
62 Strain fitness (log2 ratio) -1
0
1
2 at 59.342 kb on - strand, within H281DRAFT_06166 at 59.606 kb on - strand, within H281DRAFT_06166 at 59.608 kb on + strand, within H281DRAFT_06166 at 59.608 kb on + strand, within H281DRAFT_06166 at 59.609 kb on - strand, within H281DRAFT_06166 at 59.896 kb on + strand, within H281DRAFT_06166 at 59.919 kb on - strand, within H281DRAFT_06166 at 59.980 kb on + strand, within H281DRAFT_06166 at 59.980 kb on + strand, within H281DRAFT_06166 at 59.981 kb on - strand, within H281DRAFT_06166 at 59.981 kb on - strand, within H281DRAFT_06166 at 60.028 kb on + strand, within H281DRAFT_06166 at 60.124 kb on - strand at 60.190 kb on + strand at 60.300 kb on + strand at 60.388 kb on - strand, within H281DRAFT_06167 at 60.431 kb on + strand, within H281DRAFT_06167 at 60.462 kb on - strand, within H281DRAFT_06167 at 60.462 kb on - strand, within H281DRAFT_06167 at 60.659 kb on + strand, within H281DRAFT_06167 at 60.823 kb on + strand, within H281DRAFT_06167 at 60.836 kb on + strand, within H281DRAFT_06167 at 60.837 kb on - strand, within H281DRAFT_06167 at 60.891 kb on - strand, within H281DRAFT_06167 at 61.029 kb on - strand at 61.138 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.308 kb on - strand, within H281DRAFT_06168 at 61.591 kb on - strand at 61.849 kb on + strand, within H281DRAFT_06169 at 61.850 kb on - strand, within H281DRAFT_06169
Per-strain Table
Position Strand Gene LocusTag Fraction Gallic Acid (C) remove 59,342 - H281DRAFT_06166 0.44 -0.7 59,606 - H281DRAFT_06166 0.60 -0.0 59,608 + H281DRAFT_06166 0.60 +0.0 59,608 + H281DRAFT_06166 0.60 +0.5 59,609 - H281DRAFT_06166 0.60 -0.1 59,896 + H281DRAFT_06166 0.77 +0.1 59,919 - H281DRAFT_06166 0.78 -0.4 59,980 + H281DRAFT_06166 0.82 -0.2 59,980 + H281DRAFT_06166 0.82 -1.1 59,981 - H281DRAFT_06166 0.82 +1.4 59,981 - H281DRAFT_06166 0.82 +1.3 60,028 + H281DRAFT_06166 0.85 +0.5 60,124 - +0.3 60,190 + +1.0 60,300 + -0.2 60,388 - H281DRAFT_06167 0.12 +0.9 60,431 + H281DRAFT_06167 0.18 -0.3 60,462 - H281DRAFT_06167 0.22 +0.4 60,462 - H281DRAFT_06167 0.22 -0.5 60,659 + H281DRAFT_06167 0.49 +0.9 60,823 + H281DRAFT_06167 0.71 -0.3 60,836 + H281DRAFT_06167 0.73 +0.3 60,837 - H281DRAFT_06167 0.73 -1.3 60,891 - H281DRAFT_06167 0.81 +0.1 61,029 - +0.5 61,138 - +0.6 61,152 - -0.7 61,152 - +0.7 61,152 - +0.4 61,152 - +0.6 61,308 - H281DRAFT_06168 0.35 -0.2 61,591 - -0.0 61,849 + H281DRAFT_06169 0.46 +1.9 61,850 - H281DRAFT_06169 0.46 -0.4
Or see this region's nucleotide sequence