Experiment: Gallic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03444 and H281DRAFT_03445 are separated by 22 nucleotides H281DRAFT_03445 and H281DRAFT_03446 are separated by 28 nucleotides H281DRAFT_03446 and H281DRAFT_03447 are separated by 272 nucleotides
H281DRAFT_03444: H281DRAFT_03444 - Sugar-transfer associated ATP-grasp, at 526,478 to 527,542
_03444
H281DRAFT_03445: H281DRAFT_03445 - hypothetical protein, at 527,565 to 527,888
_03445
H281DRAFT_03446: H281DRAFT_03446 - Alpha 1,4-glycosyltransferase conserved region, at 527,917 to 528,783
_03446
H281DRAFT_03447: H281DRAFT_03447 - phasin family protein, at 529,056 to 529,565
_03447
Position (kb) 527
528
529 Strain fitness (log2 ratio) -1
0
1 at 527.041 kb on - strand, within H281DRAFT_03444 at 528.051 kb on - strand at 528.290 kb on - strand, within H281DRAFT_03446 at 528.297 kb on - strand, within H281DRAFT_03446 at 528.297 kb on - strand, within H281DRAFT_03446 at 528.299 kb on - strand, within H281DRAFT_03446 at 528.675 kb on + strand, within H281DRAFT_03446 at 528.676 kb on - strand, within H281DRAFT_03446 at 528.678 kb on - strand, within H281DRAFT_03446 at 528.900 kb on - strand at 528.923 kb on + strand at 529.241 kb on - strand, within H281DRAFT_03447 at 529.621 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gallic Acid (C) remove 527,041 - H281DRAFT_03444 0.53 +0.2 528,051 - -0.2 528,290 - H281DRAFT_03446 0.43 +0.6 528,297 - H281DRAFT_03446 0.44 +0.7 528,297 - H281DRAFT_03446 0.44 +0.4 528,299 - H281DRAFT_03446 0.44 +0.6 528,675 + H281DRAFT_03446 0.87 +1.5 528,676 - H281DRAFT_03446 0.88 +0.3 528,678 - H281DRAFT_03446 0.88 +0.1 528,900 - +0.5 528,923 + -0.0 529,241 - H281DRAFT_03447 0.36 -0.4 529,621 - -0.2
Or see this region's nucleotide sequence