Experiment: Gallic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03294 and H281DRAFT_03295 are separated by 78 nucleotides H281DRAFT_03295 and H281DRAFT_03296 are separated by 48 nucleotides H281DRAFT_03296 and H281DRAFT_03297 are separated by 70 nucleotides H281DRAFT_03297 and H281DRAFT_03298 are separated by 169 nucleotides
H281DRAFT_03294: H281DRAFT_03294 - Hemerythrin HHE cation binding domain-containing protein, at 354,516 to 355,028
_03294
H281DRAFT_03295: H281DRAFT_03295 - hypothetical protein, at 355,107 to 355,649
_03295
H281DRAFT_03296: H281DRAFT_03296 - hypothetical protein, at 355,698 to 355,925
_03296
H281DRAFT_03297: H281DRAFT_03297 - ADP-ribose pyrophosphatase YjhB, NUDIX family, at 355,996 to 356,403
_03297
H281DRAFT_03298: H281DRAFT_03298 - quinoprotein glucose dehydrogenase, at 356,573 to 359,212
_03298
Position (kb) 355
356 Strain fitness (log2 ratio) -1
0
1
2 at 355.345 kb on - strand at 355.831 kb on - strand, within H281DRAFT_03296 at 355.870 kb on + strand, within H281DRAFT_03296 at 355.914 kb on - strand at 355.942 kb on + strand at 355.946 kb on + strand at 355.946 kb on + strand at 355.947 kb on - strand at 356.192 kb on + strand, within H281DRAFT_03297 at 356.482 kb on - strand at 356.482 kb on - strand at 356.572 kb on + strand at 356.693 kb on + strand at 356.694 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gallic Acid (C) remove 355,345 - +2.3 355,831 - H281DRAFT_03296 0.58 +1.2 355,870 + H281DRAFT_03296 0.75 -0.0 355,914 - +0.4 355,942 + -1.3 355,946 + -0.1 355,946 + +0.8 355,947 - -1.5 356,192 + H281DRAFT_03297 0.48 +1.2 356,482 - +0.4 356,482 - +0.3 356,572 + +0.1 356,693 + +0.3 356,694 - -0.3
Or see this region's nucleotide sequence