Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02898

Experiment: Gallic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02897 and H281DRAFT_02898 are separated by 157 nucleotides H281DRAFT_02897: H281DRAFT_02897 - nicotinamide phosphoribosyltransferase, at 499,618 to 501,066 _02897 H281DRAFT_02898: H281DRAFT_02898 - hypothetical protein, at 501,224 to 501,523 _02898 Position (kb) 501 502Strain fitness (log2 ratio) -1 0 1at 500.244 kb on - strand, within H281DRAFT_02897at 500.394 kb on - strand, within H281DRAFT_02897at 500.645 kb on + strand, within H281DRAFT_02897at 500.645 kb on + strand, within H281DRAFT_02897at 500.645 kb on + strand, within H281DRAFT_02897at 500.940 kb on - strandat 500.978 kb on + strandat 500.978 kb on + strandat 501.106 kb on + strandat 501.106 kb on + strandat 501.107 kb on - strandat 501.241 kb on - strandat 501.303 kb on + strand, within H281DRAFT_02898at 501.460 kb on + strand, within H281DRAFT_02898at 501.588 kb on + strandat 501.752 kb on - strandat 501.752 kb on - strandat 501.752 kb on - strandat 502.105 kb on + strandat 502.106 kb on - strandat 502.106 kb on - strandat 502.180 kb on + strandat 502.191 kb on + strandat 502.192 kb on - strandat 502.192 kb on - strandat 502.193 kb on + strandat 502.211 kb on - strandat 502.211 kb on - strandat 502.211 kb on - strandat 502.263 kb on + strandat 502.264 kb on - strandat 502.313 kb on - strandat 502.321 kb on + strandat 502.383 kb on + strandat 502.384 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gallic Acid (C)
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500,244 - H281DRAFT_02897 0.43 +1.2
500,394 - H281DRAFT_02897 0.54 +0.8
500,645 + H281DRAFT_02897 0.71 +0.3
500,645 + H281DRAFT_02897 0.71 -0.0
500,645 + H281DRAFT_02897 0.71 -1.3
500,940 - +0.9
500,978 + +0.1
500,978 + -0.2
501,106 + +0.5
501,106 + -0.8
501,107 - -0.1
501,241 - +0.6
501,303 + H281DRAFT_02898 0.26 -1.3
501,460 + H281DRAFT_02898 0.79 -1.3
501,588 + -1.6
501,752 - -1.1
501,752 - +0.1
501,752 - +1.1
502,105 + +0.0
502,106 - +0.3
502,106 - -0.4
502,180 + -0.1
502,191 + +0.9
502,192 - +0.3
502,192 - -0.2
502,193 + -0.6
502,211 - +0.7
502,211 - +0.4
502,211 - +0.4
502,263 + -0.1
502,264 - -0.0
502,313 - -1.3
502,321 + -0.0
502,383 + +1.7
502,384 - +0.7

Or see this region's nucleotide sequence