Experiment: Gallic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02824 and H281DRAFT_02825 are separated by 239 nucleotides H281DRAFT_02825 and H281DRAFT_02826 are separated by 140 nucleotides
H281DRAFT_02824: H281DRAFT_02824 - cell division protein ZapE, at 417,237 to 418,325
_02824
H281DRAFT_02825: H281DRAFT_02825 - hypothetical protein, at 418,565 to 419,650
_02825
H281DRAFT_02826: H281DRAFT_02826 - transketolase, at 419,791 to 421,875
_02826
Position (kb) 418
419
420 Strain fitness (log2 ratio) -2
-1
0
1 at 417.583 kb on + strand, within H281DRAFT_02824 at 417.584 kb on - strand, within H281DRAFT_02824 at 417.709 kb on + strand, within H281DRAFT_02824 at 418.000 kb on + strand, within H281DRAFT_02824 at 418.000 kb on + strand, within H281DRAFT_02824 at 418.001 kb on - strand, within H281DRAFT_02824 at 418.001 kb on - strand, within H281DRAFT_02824 at 418.001 kb on - strand, within H281DRAFT_02824 at 418.063 kb on + strand, within H281DRAFT_02824 at 418.080 kb on - strand, within H281DRAFT_02824 at 418.140 kb on + strand, within H281DRAFT_02824 at 418.324 kb on - strand at 418.838 kb on + strand, within H281DRAFT_02825 at 418.880 kb on - strand, within H281DRAFT_02825 at 418.926 kb on - strand, within H281DRAFT_02825 at 419.289 kb on - strand, within H281DRAFT_02825 at 419.498 kb on + strand, within H281DRAFT_02825 at 419.498 kb on + strand, within H281DRAFT_02825 at 419.528 kb on + strand, within H281DRAFT_02825 at 419.562 kb on - strand at 419.778 kb on + strand at 419.779 kb on - strand at 419.785 kb on + strand at 419.792 kb on + strand at 419.793 kb on - strand at 419.846 kb on + strand at 420.026 kb on + strand, within H281DRAFT_02826 at 420.111 kb on - strand at 420.504 kb on - strand, within H281DRAFT_02826 at 420.504 kb on - strand, within H281DRAFT_02826 at 420.620 kb on + strand, within H281DRAFT_02826
Per-strain Table
Position Strand Gene LocusTag Fraction Gallic Acid (C) remove 417,583 + H281DRAFT_02824 0.32 +0.4 417,584 - H281DRAFT_02824 0.32 +0.4 417,709 + H281DRAFT_02824 0.43 +0.6 418,000 + H281DRAFT_02824 0.70 -0.4 418,000 + H281DRAFT_02824 0.70 +0.5 418,001 - H281DRAFT_02824 0.70 -0.5 418,001 - H281DRAFT_02824 0.70 -2.6 418,001 - H281DRAFT_02824 0.70 +0.2 418,063 + H281DRAFT_02824 0.76 +0.2 418,080 - H281DRAFT_02824 0.77 +0.9 418,140 + H281DRAFT_02824 0.83 +0.4 418,324 - +0.1 418,838 + H281DRAFT_02825 0.25 +0.6 418,880 - H281DRAFT_02825 0.29 +0.3 418,926 - H281DRAFT_02825 0.33 +0.3 419,289 - H281DRAFT_02825 0.67 +0.6 419,498 + H281DRAFT_02825 0.86 +0.5 419,498 + H281DRAFT_02825 0.86 +0.8 419,528 + H281DRAFT_02825 0.89 -0.2 419,562 - +0.5 419,778 + +0.0 419,779 - -2.0 419,785 + -0.3 419,792 + +1.4 419,793 - -0.2 419,846 + -0.9 420,026 + H281DRAFT_02826 0.11 +1.7 420,111 - -0.2 420,504 - H281DRAFT_02826 0.34 -0.3 420,504 - H281DRAFT_02826 0.34 +0.7 420,620 + H281DRAFT_02826 0.40 +0.2
Or see this region's nucleotide sequence