Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00725

Experiment: Gallic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00724 and H281DRAFT_00725 overlap by 4 nucleotidesH281DRAFT_00725 and H281DRAFT_00726 overlap by 1 nucleotides H281DRAFT_00724: H281DRAFT_00724 - protein of unknown function (DUF1839), at 817,071 to 818,156 _00724 H281DRAFT_00725: H281DRAFT_00725 - hypothetical protein, at 818,153 to 819,217 _00725 H281DRAFT_00726: H281DRAFT_00726 - acyl-CoA dehydrogenase, at 819,217 to 820,473 _00726 Position (kb) 818 819 820Strain fitness (log2 ratio) -1 0 1at 817.569 kb on + strand, within H281DRAFT_00724at 817.728 kb on + strand, within H281DRAFT_00724at 817.960 kb on + strand, within H281DRAFT_00724at 818.241 kb on - strandat 818.612 kb on + strand, within H281DRAFT_00725at 819.638 kb on + strand, within H281DRAFT_00726at 820.167 kb on - strand, within H281DRAFT_00726

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Per-strain Table

Position Strand Gene LocusTag Fraction Gallic Acid (C)
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817,569 + H281DRAFT_00724 0.46 -0.7
817,728 + H281DRAFT_00724 0.60 +0.3
817,960 + H281DRAFT_00724 0.82 -1.7
818,241 - -0.2
818,612 + H281DRAFT_00725 0.43 +0.8
819,638 + H281DRAFT_00726 0.33 +0.6
820,167 - H281DRAFT_00726 0.76 -0.5

Or see this region's nucleotide sequence