Experiment: Gallic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00451 and H281DRAFT_00452 are separated by 438 nucleotides H281DRAFT_00452 and H281DRAFT_00453 are separated by 143 nucleotides
H281DRAFT_00451: H281DRAFT_00451 - Rhodanese-related sulfurtransferase, at 501,150 to 501,614
_00451
H281DRAFT_00452: H281DRAFT_00452 - L-glutamine synthetase, at 502,053 to 503,468
_00452
H281DRAFT_00453: H281DRAFT_00453 - two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL, at 503,612 to 504,754
_00453
Position (kb) 502
503
504 Strain fitness (log2 ratio) -2
-1
0
1 at 501.099 kb on + strand at 501.109 kb on + strand at 501.109 kb on + strand at 501.250 kb on + strand, within H281DRAFT_00451 at 501.250 kb on + strand, within H281DRAFT_00451 at 501.250 kb on + strand, within H281DRAFT_00451 at 501.260 kb on + strand, within H281DRAFT_00451 at 501.335 kb on + strand, within H281DRAFT_00451 at 501.421 kb on + strand, within H281DRAFT_00451 at 501.422 kb on - strand, within H281DRAFT_00451 at 501.422 kb on - strand, within H281DRAFT_00451 at 501.593 kb on - strand at 501.593 kb on - strand at 501.603 kb on + strand at 501.604 kb on - strand at 501.604 kb on - strand at 501.604 kb on - strand at 501.645 kb on + strand at 501.743 kb on - strand at 501.945 kb on + strand at 501.958 kb on + strand at 503.987 kb on + strand, within H281DRAFT_00453 at 503.987 kb on + strand, within H281DRAFT_00453 at 503.987 kb on + strand, within H281DRAFT_00453 at 504.189 kb on - strand, within H281DRAFT_00453 at 504.189 kb on - strand, within H281DRAFT_00453
Per-strain Table
Position Strand Gene LocusTag Fraction Gallic Acid (C) remove 501,099 + -0.1 501,109 + +0.9 501,109 + +0.9 501,250 + H281DRAFT_00451 0.22 +0.8 501,250 + H281DRAFT_00451 0.22 +0.2 501,250 + H281DRAFT_00451 0.22 +0.5 501,260 + H281DRAFT_00451 0.24 +0.4 501,335 + H281DRAFT_00451 0.40 +0.1 501,421 + H281DRAFT_00451 0.58 -1.8 501,422 - H281DRAFT_00451 0.58 -0.4 501,422 - H281DRAFT_00451 0.58 +0.0 501,593 - +0.5 501,593 - +0.3 501,603 + -1.0 501,604 - +0.1 501,604 - +0.7 501,604 - -0.5 501,645 + -0.6 501,743 - -0.5 501,945 + +0.1 501,958 + +0.7 503,987 + H281DRAFT_00453 0.33 +1.1 503,987 + H281DRAFT_00453 0.33 -0.4 503,987 + H281DRAFT_00453 0.33 -0.9 504,189 - H281DRAFT_00453 0.50 -1.5 504,189 - H281DRAFT_00453 0.50 -1.7
Or see this region's nucleotide sequence