Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19255

Experiment: D-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19250 and BWI76_RS19255 overlap by 1 nucleotidesBWI76_RS19255 and BWI76_RS19260 are separated by 0 nucleotides BWI76_RS19250: BWI76_RS19250 - multidrug transporter subunit MdtA, at 4,005,098 to 4,006,342 _RS19250 BWI76_RS19255: BWI76_RS19255 - multidrug transporter subunit MdtB, at 4,006,342 to 4,009,464 _RS19255 BWI76_RS19260: BWI76_RS19260 - multidrug transporter subunit MdtC, at 4,009,465 to 4,012,542 _RS19260 Position (kb) 4006 4007 4008 4009 4010Strain fitness (log2 ratio) -3 -2 -1 0 1at 4005.364 kb on - strand, within BWI76_RS19250at 4005.514 kb on - strand, within BWI76_RS19250at 4005.716 kb on - strand, within BWI76_RS19250at 4005.716 kb on - strand, within BWI76_RS19250at 4005.716 kb on - strand, within BWI76_RS19250at 4005.798 kb on + strand, within BWI76_RS19250at 4006.164 kb on + strand, within BWI76_RS19250at 4006.234 kb on + strandat 4006.427 kb on + strandat 4006.707 kb on - strand, within BWI76_RS19255at 4006.745 kb on - strand, within BWI76_RS19255at 4006.783 kb on + strand, within BWI76_RS19255at 4006.944 kb on + strand, within BWI76_RS19255at 4006.967 kb on - strand, within BWI76_RS19255at 4007.185 kb on - strand, within BWI76_RS19255at 4007.230 kb on - strand, within BWI76_RS19255at 4007.323 kb on - strand, within BWI76_RS19255at 4007.363 kb on + strand, within BWI76_RS19255at 4007.486 kb on + strand, within BWI76_RS19255at 4007.626 kb on - strand, within BWI76_RS19255at 4007.911 kb on + strand, within BWI76_RS19255at 4007.963 kb on - strand, within BWI76_RS19255at 4007.978 kb on - strand, within BWI76_RS19255at 4007.990 kb on + strand, within BWI76_RS19255at 4008.179 kb on + strand, within BWI76_RS19255at 4008.328 kb on + strand, within BWI76_RS19255at 4008.368 kb on + strand, within BWI76_RS19255at 4008.564 kb on + strand, within BWI76_RS19255at 4008.643 kb on + strand, within BWI76_RS19255at 4008.815 kb on + strand, within BWI76_RS19255at 4009.196 kb on - strandat 4009.196 kb on - strandat 4009.531 kb on - strandat 4009.541 kb on - strandat 4009.797 kb on + strand, within BWI76_RS19260at 4009.856 kb on + strand, within BWI76_RS19260at 4009.966 kb on - strand, within BWI76_RS19260at 4010.021 kb on + strandat 4010.422 kb on + strand, within BWI76_RS19260at 4010.430 kb on - strand, within BWI76_RS19260

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Serine (N)
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4,005,364 - BWI76_RS19250 0.21 -1.6
4,005,514 - BWI76_RS19250 0.33 -0.7
4,005,716 - BWI76_RS19250 0.50 +0.0
4,005,716 - BWI76_RS19250 0.50 +0.1
4,005,716 - BWI76_RS19250 0.50 +0.2
4,005,798 + BWI76_RS19250 0.56 +0.3
4,006,164 + BWI76_RS19250 0.86 -0.2
4,006,234 + +0.0
4,006,427 + -1.0
4,006,707 - BWI76_RS19255 0.12 -1.3
4,006,745 - BWI76_RS19255 0.13 -0.0
4,006,783 + BWI76_RS19255 0.14 -1.3
4,006,944 + BWI76_RS19255 0.19 -0.2
4,006,967 - BWI76_RS19255 0.20 -0.4
4,007,185 - BWI76_RS19255 0.27 -0.4
4,007,230 - BWI76_RS19255 0.28 -1.0
4,007,323 - BWI76_RS19255 0.31 -1.1
4,007,363 + BWI76_RS19255 0.33 -1.3
4,007,486 + BWI76_RS19255 0.37 -0.9
4,007,626 - BWI76_RS19255 0.41 +1.1
4,007,911 + BWI76_RS19255 0.50 -2.1
4,007,963 - BWI76_RS19255 0.52 -0.4
4,007,978 - BWI76_RS19255 0.52 -0.4
4,007,990 + BWI76_RS19255 0.53 -1.5
4,008,179 + BWI76_RS19255 0.59 -0.9
4,008,328 + BWI76_RS19255 0.64 +0.1
4,008,368 + BWI76_RS19255 0.65 +0.5
4,008,564 + BWI76_RS19255 0.71 -0.3
4,008,643 + BWI76_RS19255 0.74 +0.1
4,008,815 + BWI76_RS19255 0.79 +0.4
4,009,196 - -0.1
4,009,196 - -3.2
4,009,531 - +0.2
4,009,541 - -1.4
4,009,797 + BWI76_RS19260 0.11 -0.8
4,009,856 + BWI76_RS19260 0.13 +0.3
4,009,966 - BWI76_RS19260 0.16 -0.1
4,010,021 + +0.7
4,010,422 + BWI76_RS19260 0.31 -0.4
4,010,430 - BWI76_RS19260 0.31 +0.8

Or see this region's nucleotide sequence