Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19250 and BWI76_RS19255 overlap by 1 nucleotides BWI76_RS19255 and BWI76_RS19260 are separated by 0 nucleotides
BWI76_RS19250: BWI76_RS19250 - multidrug transporter subunit MdtA, at 4,005,098 to 4,006,342
_RS19250
BWI76_RS19255: BWI76_RS19255 - multidrug transporter subunit MdtB, at 4,006,342 to 4,009,464
_RS19255
BWI76_RS19260: BWI76_RS19260 - multidrug transporter subunit MdtC, at 4,009,465 to 4,012,542
_RS19260
Position (kb)
4006
4007
4008
4009
4010 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4005.364 kb on - strand, within BWI76_RS19250 at 4005.514 kb on - strand, within BWI76_RS19250 at 4005.716 kb on - strand, within BWI76_RS19250 at 4005.716 kb on - strand, within BWI76_RS19250 at 4005.716 kb on - strand, within BWI76_RS19250 at 4005.798 kb on + strand, within BWI76_RS19250 at 4006.164 kb on + strand, within BWI76_RS19250 at 4006.234 kb on + strand at 4006.427 kb on + strand at 4006.707 kb on - strand, within BWI76_RS19255 at 4006.745 kb on - strand, within BWI76_RS19255 at 4006.783 kb on + strand, within BWI76_RS19255 at 4006.944 kb on + strand, within BWI76_RS19255 at 4006.967 kb on - strand, within BWI76_RS19255 at 4007.185 kb on - strand, within BWI76_RS19255 at 4007.230 kb on - strand, within BWI76_RS19255 at 4007.323 kb on - strand, within BWI76_RS19255 at 4007.363 kb on + strand, within BWI76_RS19255 at 4007.486 kb on + strand, within BWI76_RS19255 at 4007.626 kb on - strand, within BWI76_RS19255 at 4007.911 kb on + strand, within BWI76_RS19255 at 4007.963 kb on - strand, within BWI76_RS19255 at 4007.978 kb on - strand, within BWI76_RS19255 at 4007.990 kb on + strand, within BWI76_RS19255 at 4008.179 kb on + strand, within BWI76_RS19255 at 4008.328 kb on + strand, within BWI76_RS19255 at 4008.368 kb on + strand, within BWI76_RS19255 at 4008.564 kb on + strand, within BWI76_RS19255 at 4008.643 kb on + strand, within BWI76_RS19255 at 4008.815 kb on + strand, within BWI76_RS19255 at 4009.196 kb on - strand at 4009.196 kb on - strand at 4009.531 kb on - strand at 4009.541 kb on - strand at 4009.797 kb on + strand, within BWI76_RS19260 at 4009.856 kb on + strand, within BWI76_RS19260 at 4009.966 kb on - strand, within BWI76_RS19260 at 4010.021 kb on + strand at 4010.422 kb on + strand, within BWI76_RS19260 at 4010.430 kb on - strand, within BWI76_RS19260
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 4,005,364 - BWI76_RS19250 0.21 -1.6 4,005,514 - BWI76_RS19250 0.33 -0.7 4,005,716 - BWI76_RS19250 0.50 +0.0 4,005,716 - BWI76_RS19250 0.50 +0.1 4,005,716 - BWI76_RS19250 0.50 +0.2 4,005,798 + BWI76_RS19250 0.56 +0.3 4,006,164 + BWI76_RS19250 0.86 -0.2 4,006,234 + +0.0 4,006,427 + -1.0 4,006,707 - BWI76_RS19255 0.12 -1.3 4,006,745 - BWI76_RS19255 0.13 -0.0 4,006,783 + BWI76_RS19255 0.14 -1.3 4,006,944 + BWI76_RS19255 0.19 -0.2 4,006,967 - BWI76_RS19255 0.20 -0.4 4,007,185 - BWI76_RS19255 0.27 -0.4 4,007,230 - BWI76_RS19255 0.28 -1.0 4,007,323 - BWI76_RS19255 0.31 -1.1 4,007,363 + BWI76_RS19255 0.33 -1.3 4,007,486 + BWI76_RS19255 0.37 -0.9 4,007,626 - BWI76_RS19255 0.41 +1.1 4,007,911 + BWI76_RS19255 0.50 -2.1 4,007,963 - BWI76_RS19255 0.52 -0.4 4,007,978 - BWI76_RS19255 0.52 -0.4 4,007,990 + BWI76_RS19255 0.53 -1.5 4,008,179 + BWI76_RS19255 0.59 -0.9 4,008,328 + BWI76_RS19255 0.64 +0.1 4,008,368 + BWI76_RS19255 0.65 +0.5 4,008,564 + BWI76_RS19255 0.71 -0.3 4,008,643 + BWI76_RS19255 0.74 +0.1 4,008,815 + BWI76_RS19255 0.79 +0.4 4,009,196 - -0.1 4,009,196 - -3.2 4,009,531 - +0.2 4,009,541 - -1.4 4,009,797 + BWI76_RS19260 0.11 -0.8 4,009,856 + BWI76_RS19260 0.13 +0.3 4,009,966 - BWI76_RS19260 0.16 -0.1 4,010,021 + +0.7 4,010,422 + BWI76_RS19260 0.31 -0.4 4,010,430 - BWI76_RS19260 0.31 +0.8
Or see this region's nucleotide sequence