Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09950

Experiment: D-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09940 and BWI76_RS09945 overlap by 1 nucleotidesBWI76_RS09945 and BWI76_RS09950 are separated by 256 nucleotidesBWI76_RS09950 and BWI76_RS09955 are separated by 65 nucleotidesBWI76_RS09955 and BWI76_RS09960 are separated by 69 nucleotides BWI76_RS09940: BWI76_RS09940 - paraquat-inducible protein B, at 2,092,453 to 2,094,090 _RS09940 BWI76_RS09945: BWI76_RS09945 - lipoprotein, at 2,094,090 to 2,094,653 _RS09945 BWI76_RS09950: BWI76_RS09950 - ribosome modulation factor, at 2,094,910 to 2,095,077 _RS09950 BWI76_RS09955: BWI76_RS09955 - beta-hydroxydecanoyl-ACP dehydratase, at 2,095,143 to 2,095,661 _RS09955 BWI76_RS09960: BWI76_RS09960 - Lon protease, at 2,095,731 to 2,097,488 _RS09960 Position (kb) 2094 2095 2096Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2094.080 kb on - strandat 2094.589 kb on + strand, within BWI76_RS09945at 2094.599 kb on + strandat 2094.599 kb on + strandat 2094.607 kb on - strandat 2095.070 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Serine (N)
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2,094,080 - -2.4
2,094,589 + BWI76_RS09945 0.88 +3.3
2,094,599 + -2.0
2,094,599 + -0.4
2,094,607 - +0.3
2,095,070 - +0.0

Or see this region's nucleotide sequence