Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09240 and BWI76_RS09245 overlap by 4 nucleotides BWI76_RS09245 and BWI76_RS09250 are separated by 114 nucleotides BWI76_RS09250 and BWI76_RS09255 are separated by 398 nucleotides
BWI76_RS09240: BWI76_RS09240 - phosphoadenosine phosphosulfate reductase, at 1,945,101 to 1,946,111
_RS09240
BWI76_RS09245: BWI76_RS09245 - bacteriophage replication gene A protein, at 1,946,108 to 1,948,519
_RS09245
BWI76_RS09250: BWI76_RS09250 - hypothetical protein, at 1,948,634 to 1,948,819
_RS09250
BWI76_RS09255: BWI76_RS09255 - hypothetical protein, at 1,949,218 to 1,950,090
_RS09255
Position (kb)
1946
1947
1948
1949 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1945.182 kb on - strand at 1945.182 kb on - strand at 1945.218 kb on - strand, within BWI76_RS09240 at 1945.331 kb on + strand, within BWI76_RS09240 at 1945.361 kb on + strand at 1945.535 kb on + strand, within BWI76_RS09240 at 1945.606 kb on + strand, within BWI76_RS09240 at 1946.216 kb on + strand at 1946.235 kb on + strand at 1946.370 kb on + strand, within BWI76_RS09245 at 1946.378 kb on - strand, within BWI76_RS09245 at 1946.440 kb on + strand, within BWI76_RS09245 at 1946.467 kb on - strand, within BWI76_RS09245 at 1946.586 kb on + strand, within BWI76_RS09245 at 1946.594 kb on - strand, within BWI76_RS09245 at 1946.604 kb on - strand, within BWI76_RS09245 at 1946.657 kb on + strand, within BWI76_RS09245 at 1946.701 kb on + strand, within BWI76_RS09245 at 1946.985 kb on + strand, within BWI76_RS09245 at 1947.111 kb on + strand, within BWI76_RS09245 at 1947.129 kb on - strand, within BWI76_RS09245 at 1947.270 kb on - strand, within BWI76_RS09245 at 1947.405 kb on + strand, within BWI76_RS09245 at 1947.420 kb on + strand, within BWI76_RS09245 at 1947.428 kb on - strand, within BWI76_RS09245 at 1947.521 kb on - strand, within BWI76_RS09245 at 1947.549 kb on + strand, within BWI76_RS09245 at 1947.567 kb on + strand, within BWI76_RS09245 at 1947.595 kb on + strand, within BWI76_RS09245 at 1947.660 kb on + strand, within BWI76_RS09245 at 1947.668 kb on - strand at 1947.831 kb on - strand, within BWI76_RS09245 at 1947.935 kb on + strand, within BWI76_RS09245 at 1947.937 kb on + strand, within BWI76_RS09245 at 1948.149 kb on - strand, within BWI76_RS09245 at 1948.162 kb on - strand, within BWI76_RS09245 at 1948.671 kb on + strand, within BWI76_RS09250 at 1948.714 kb on - strand, within BWI76_RS09250 at 1948.776 kb on + strand, within BWI76_RS09250 at 1948.776 kb on + strand, within BWI76_RS09250 at 1948.776 kb on + strand, within BWI76_RS09250 at 1948.789 kb on - strand, within BWI76_RS09250 at 1948.791 kb on + strand, within BWI76_RS09250 at 1948.796 kb on + strand, within BWI76_RS09250 at 1948.799 kb on - strand, within BWI76_RS09250 at 1948.842 kb on + strand at 1948.877 kb on + strand at 1948.927 kb on + strand at 1948.964 kb on + strand at 1948.971 kb on - strand at 1949.002 kb on + strand at 1949.035 kb on - strand at 1949.039 kb on - strand at 1949.039 kb on - strand at 1949.039 kb on - strand at 1949.093 kb on - strand at 1949.098 kb on - strand at 1949.233 kb on + strand at 1949.243 kb on + strand at 1949.243 kb on + strand at 1949.244 kb on + strand at 1949.251 kb on + strand at 1949.337 kb on + strand, within BWI76_RS09255 at 1949.337 kb on + strand, within BWI76_RS09255 at 1949.512 kb on + strand, within BWI76_RS09255
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 1,945,182 - +0.0 1,945,182 - -0.9 1,945,218 - BWI76_RS09240 0.12 -0.4 1,945,331 + BWI76_RS09240 0.23 -0.4 1,945,361 + -0.7 1,945,535 + BWI76_RS09240 0.43 +0.6 1,945,606 + BWI76_RS09240 0.50 +0.4 1,946,216 + +2.2 1,946,235 + +0.0 1,946,370 + BWI76_RS09245 0.11 +0.7 1,946,378 - BWI76_RS09245 0.11 +0.7 1,946,440 + BWI76_RS09245 0.14 +0.2 1,946,467 - BWI76_RS09245 0.15 +0.4 1,946,586 + BWI76_RS09245 0.20 +1.2 1,946,594 - BWI76_RS09245 0.20 -0.4 1,946,604 - BWI76_RS09245 0.21 +0.3 1,946,657 + BWI76_RS09245 0.23 -0.1 1,946,701 + BWI76_RS09245 0.25 -0.7 1,946,985 + BWI76_RS09245 0.36 +0.6 1,947,111 + BWI76_RS09245 0.42 -1.6 1,947,129 - BWI76_RS09245 0.42 -1.1 1,947,270 - BWI76_RS09245 0.48 +0.8 1,947,405 + BWI76_RS09245 0.54 +0.4 1,947,420 + BWI76_RS09245 0.54 +1.1 1,947,428 - BWI76_RS09245 0.55 +1.0 1,947,521 - BWI76_RS09245 0.59 -0.2 1,947,549 + BWI76_RS09245 0.60 +0.6 1,947,567 + BWI76_RS09245 0.60 +1.2 1,947,595 + BWI76_RS09245 0.62 +1.6 1,947,660 + BWI76_RS09245 0.64 +0.6 1,947,668 - +0.3 1,947,831 - BWI76_RS09245 0.71 +0.9 1,947,935 + BWI76_RS09245 0.76 +0.3 1,947,937 + BWI76_RS09245 0.76 +1.3 1,948,149 - BWI76_RS09245 0.85 +0.2 1,948,162 - BWI76_RS09245 0.85 +1.0 1,948,671 + BWI76_RS09250 0.20 -3.1 1,948,714 - BWI76_RS09250 0.43 +0.8 1,948,776 + BWI76_RS09250 0.76 -2.3 1,948,776 + BWI76_RS09250 0.76 -1.5 1,948,776 + BWI76_RS09250 0.76 -2.7 1,948,789 - BWI76_RS09250 0.83 -1.4 1,948,791 + BWI76_RS09250 0.84 -1.8 1,948,796 + BWI76_RS09250 0.87 -0.2 1,948,799 - BWI76_RS09250 0.89 +0.7 1,948,842 + -2.7 1,948,877 + -3.5 1,948,927 + +0.2 1,948,964 + -0.7 1,948,971 - -0.4 1,949,002 + -1.0 1,949,035 - +1.3 1,949,039 - -1.5 1,949,039 - +0.5 1,949,039 - -1.7 1,949,093 - -0.1 1,949,098 - -1.7 1,949,233 + +1.1 1,949,243 + -0.7 1,949,243 + -1.6 1,949,244 + -3.1 1,949,251 + -1.5 1,949,337 + BWI76_RS09255 0.14 -1.6 1,949,337 + BWI76_RS09255 0.14 +3.8 1,949,512 + BWI76_RS09255 0.34 -0.8
Or see this region's nucleotide sequence