Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07600 and BWI76_RS07605 are separated by 186 nucleotides BWI76_RS07605 and BWI76_RS07610 are separated by 49 nucleotides BWI76_RS07610 and BWI76_RS07615 are separated by 14 nucleotides
BWI76_RS07600: BWI76_RS07600 - aspartate aminotransferase family protein, at 1,609,190 to 1,610,527
_RS07600
BWI76_RS07605: BWI76_RS07605 - N-acetyltransferase GCN5, at 1,610,714 to 1,611,409
_RS07605
BWI76_RS07610: BWI76_RS07610 - choline dehydrogenase, at 1,611,459 to 1,613,123
_RS07610
BWI76_RS07615: BWI76_RS07615 - betaine-aldehyde dehydrogenase, at 1,613,138 to 1,614,610
_RS07615
Position (kb)
1611
1612
1613
1614 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1610.576 kb on + strand at 1610.586 kb on + strand at 1610.697 kb on + strand at 1610.795 kb on + strand, within BWI76_RS07605 at 1610.827 kb on + strand, within BWI76_RS07605 at 1610.872 kb on - strand, within BWI76_RS07605 at 1610.956 kb on + strand, within BWI76_RS07605 at 1611.450 kb on + strand at 1611.458 kb on - strand at 1612.209 kb on - strand, within BWI76_RS07610 at 1612.221 kb on - strand, within BWI76_RS07610 at 1612.354 kb on - strand, within BWI76_RS07610 at 1612.404 kb on - strand, within BWI76_RS07610 at 1612.576 kb on - strand, within BWI76_RS07610 at 1612.678 kb on - strand, within BWI76_RS07610 at 1612.678 kb on - strand, within BWI76_RS07610 at 1612.968 kb on + strand at 1613.568 kb on + strand, within BWI76_RS07615 at 1613.764 kb on - strand, within BWI76_RS07615 at 1613.769 kb on - strand, within BWI76_RS07615 at 1613.777 kb on - strand, within BWI76_RS07615 at 1614.049 kb on + strand, within BWI76_RS07615 at 1614.090 kb on - strand, within BWI76_RS07615
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 1,610,576 + +0.5 1,610,586 + +0.7 1,610,697 + -0.1 1,610,795 + BWI76_RS07605 0.12 +1.2 1,610,827 + BWI76_RS07605 0.16 +0.0 1,610,872 - BWI76_RS07605 0.23 -0.0 1,610,956 + BWI76_RS07605 0.35 +1.4 1,611,450 + +0.0 1,611,458 - +0.2 1,612,209 - BWI76_RS07610 0.45 -0.4 1,612,221 - BWI76_RS07610 0.46 +0.7 1,612,354 - BWI76_RS07610 0.54 +0.6 1,612,404 - BWI76_RS07610 0.57 -0.5 1,612,576 - BWI76_RS07610 0.67 -0.1 1,612,678 - BWI76_RS07610 0.73 -0.2 1,612,678 - BWI76_RS07610 0.73 +1.3 1,612,968 + -0.4 1,613,568 + BWI76_RS07615 0.29 -4.1 1,613,764 - BWI76_RS07615 0.42 +0.4 1,613,769 - BWI76_RS07615 0.43 +0.7 1,613,777 - BWI76_RS07615 0.43 -0.6 1,614,049 + BWI76_RS07615 0.62 -0.6 1,614,090 - BWI76_RS07615 0.65 -0.2
Or see this region's nucleotide sequence