Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3449

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
3,630,415	+		Dshi_3447	0.52	-1.7
3,630,470	+		Dshi_3447	0.63	-0.4
3,630,478	-		Dshi_3447	0.64	-0.9
3,630,496	-		Dshi_3447	0.68	-0.7
3,630,579	-		Dshi_3447	0.84	-0.8
3,630,628	-				-0.6
3,630,656	+				-0.5
3,630,817	+		Dshi_3448	0.22	-0.7
3,631,179	+		Dshi_3448	0.74	-1.5
3,631,185	+		Dshi_3448	0.75	-1.2
3,631,228	+		Dshi_3448	0.81	-2.0
3,631,299	+				+0.3
3,631,364	+				-0.3
3,631,367	-				-0.2
3,631,369	+				-0.2
3,631,369	-				-0.1
3,631,377	-				+0.1
3,631,379	+				+0.1
3,631,379	+				-1.5
3,631,387	-				+0.8
3,631,387	-				-0.5
3,632,756	+				+0.1
3,632,801	+				-1.1
3,632,801	+				+1.0
3,632,801	+				-1.2
3,632,801	+				+1.3
3,632,801	+				+0.6
3,632,801	+				+0.8
3,632,801	+				+0.4
3,632,801	+				-0.3
3,632,801	+				-0.6
3,632,801	+				+1.1
3,632,801	+				+0.6
3,632,809	-				-0.5
3,632,809	-				-0.0
3,632,809	-				-0.5
3,632,809	-				-0.5
3,632,809	-				+0.1
3,632,819	-				+0.6
3,632,835	+				+0.0
3,632,835	+				+0.3
3,632,835	+				-0.1
3,632,835	+				+0.0
3,632,835	+				+0.1
3,632,843	-		Dshi_3451	0.11	-0.9
3,632,850	+		Dshi_3451	0.12	+1.5
3,632,857	+		Dshi_3451	0.13	-0.6
3,632,857	+		Dshi_3451	0.13	-0.2
3,632,857	+		Dshi_3451	0.13	-1.1
3,632,857	+		Dshi_3451	0.13	-0.0
3,632,857	+		Dshi_3451	0.13	-1.0
3,632,857	+		Dshi_3451	0.13	-0.1
3,632,857	+		Dshi_3451	0.13	-1.3
3,632,857	+		Dshi_3451	0.13	-0.3
3,632,857	+		Dshi_3451	0.13	-1.3
3,632,857	+		Dshi_3451	0.13	-1.3
3,632,857	+		Dshi_3451	0.13	-0.1
3,632,857	+		Dshi_3451	0.13	+1.0
3,632,864	-		Dshi_3451	0.14	-0.4
3,632,864	-		Dshi_3451	0.14	+0.1
3,632,865	-		Dshi_3451	0.15	+1.1
3,632,865	-		Dshi_3451	0.15	-0.3
3,632,865	-		Dshi_3451	0.15	+0.6
3,632,865	-		Dshi_3451	0.15	-0.6
3,632,865	-		Dshi_3451	0.15	-1.9
3,632,865	-		Dshi_3451	0.15	+0.5
3,632,865	-		Dshi_3451	0.15	-0.4
3,632,865	-		Dshi_3451	0.15	-0.1
3,632,865	-		Dshi_3451	0.15	-0.6
3,632,865	-		Dshi_3451	0.15	+0.4
3,632,865	-		Dshi_3451	0.15	-1.0
3,632,865	-		Dshi_3451	0.15	+0.9
3,632,865	-		Dshi_3451	0.15	-0.2
3,632,871	+		Dshi_3451	0.16	+0.6
3,632,882	+		Dshi_3451	0.17	+0.0
3,632,890	+		Dshi_3451	0.19	+0.6
3,632,890	+		Dshi_3451	0.19	+0.6
3,632,890	+		Dshi_3451	0.19	-0.2
3,632,891	-		Dshi_3451	0.19	+1.8
3,632,892	-		Dshi_3451	0.19	-1.3
3,632,898	-		Dshi_3451	0.20	+0.2
3,632,904	+		Dshi_3451	0.21	+0.1
3,632,904	+		Dshi_3451	0.21	+0.8
3,632,904	+		Dshi_3451	0.21	-0.1
3,632,904	+		Dshi_3451	0.21	-0.8
3,632,904	+		Dshi_3451	0.21	+1.5
3,632,906	+		Dshi_3451	0.21	-0.1
3,632,912	-		Dshi_3451	0.22	-0.7
3,632,912	-		Dshi_3451	0.22	+0.9
3,632,912	-		Dshi_3451	0.22	-0.6
3,632,912	-		Dshi_3451	0.22	+0.2
3,632,913	+		Dshi_3451	0.23	-0.6
3,632,918	+		Dshi_3451	0.23	-0.4
3,632,918	+		Dshi_3451	0.23	+0.2
3,632,918	+		Dshi_3451	0.23	+0.2
3,632,918	+		Dshi_3451	0.23	-0.1
3,632,926	-		Dshi_3451	0.25	-0.3
3,632,926	-		Dshi_3451	0.25	+0.1
3,632,926	-		Dshi_3451	0.25	-0.8
3,632,926	-		Dshi_3451	0.25	-0.7
3,632,926	-		Dshi_3451	0.25	+0.9
3,632,942	+		Dshi_3451	0.27	+2.0
3,632,942	+		Dshi_3451	0.27	+0.4
3,632,942	+		Dshi_3451	0.27	+0.2
3,632,944	+		Dshi_3451	0.28	-0.2