Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3259

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
3,424,008	-		Dshi_3258	0.53	+0.5
3,424,034	+		Dshi_3258	0.55	+0.1
3,424,115	+		Dshi_3258	0.59	+0.3
3,424,123	-		Dshi_3258	0.59	+0.9
3,424,189	-		Dshi_3258	0.62	+1.0
3,424,195	-		Dshi_3258	0.62	+0.7
3,424,201	-		Dshi_3258	0.63	+0.2
3,424,205	-		Dshi_3258	0.63	-0.1
3,424,349	-		Dshi_3258	0.70	+0.3
3,424,556	-		Dshi_3258	0.80	+0.8
3,424,556	-		Dshi_3258	0.80	+1.1
3,424,576	-		Dshi_3258	0.81	-0.4
3,424,576	-		Dshi_3258	0.81	+0.3
3,424,580	+		Dshi_3258	0.81	-0.3
3,424,682	+		Dshi_3258	0.86	-0.5
3,424,690	+		Dshi_3258	0.86	+0.5
3,424,707	-		Dshi_3258	0.87	+0.2
3,424,751	-		Dshi_3258	0.89	+0.3
3,424,804	+				+1.2
3,424,804	+				-0.3
3,424,846	+				+0.7
3,424,857	+				-0.8
3,425,059	+				-0.9
3,425,127	-				+0.0
3,425,127	-				+0.5
3,425,141	-				+0.2
3,425,146	-				+0.5
3,425,146	-				-0.4
3,425,158	+				+0.1
3,425,158	+				+0.3
3,425,236	+		Dshi_3259	0.13	-0.1
3,425,244	-		Dshi_3259	0.13	+0.0
3,425,353	-		Dshi_3259	0.19	+0.8
3,425,445	-		Dshi_3259	0.24	-2.4
3,425,456	-		Dshi_3259	0.25	+0.9
3,425,474	+		Dshi_3259	0.26	+1.0
3,425,482	-		Dshi_3259	0.26	+1.1
3,425,632	-		Dshi_3259	0.34	+0.5
3,425,642	+		Dshi_3259	0.35	+1.6
3,425,697	-		Dshi_3259	0.38	-0.7
3,425,697	-		Dshi_3259	0.38	+1.0
3,425,697	-		Dshi_3259	0.38	+0.2
3,425,797	+		Dshi_3259	0.43	+0.3
3,425,911	-		Dshi_3259	0.49	-0.0
3,425,955	-		Dshi_3259	0.52	+0.5
3,426,021	+		Dshi_3259	0.55	+1.5
3,426,029	-		Dshi_3259	0.55	+0.2
3,426,064	+		Dshi_3259	0.57	+0.1
3,426,072	-		Dshi_3259	0.58	-0.2
3,426,072	-		Dshi_3259	0.58	+0.5
3,426,122	+		Dshi_3259	0.60	-0.7
3,426,142	-		Dshi_3259	0.62	+0.1
3,426,189	+		Dshi_3259	0.64	+1.1
3,426,246	+		Dshi_3259	0.67	-0.1
3,426,303	-		Dshi_3259	0.70	-0.0
3,426,305	+		Dshi_3259	0.70	-0.1
3,426,341	+		Dshi_3259	0.72	-0.3
3,426,353	-		Dshi_3259	0.73	+2.6
3,426,367	-		Dshi_3259	0.74	-0.7
3,426,374	-		Dshi_3259	0.74	+0.5
3,426,488	-		Dshi_3259	0.80	+1.0
3,426,502	-		Dshi_3259	0.81	-0.0
3,426,620	-		Dshi_3259	0.87	+0.1
3,426,640	+		Dshi_3259	0.88	+0.1
3,426,684	-				+0.5
3,426,822	-				-0.4
3,426,833	-				-0.3
3,426,856	-				-0.1
3,426,890	+				-0.3
3,426,890	+				+0.0
3,426,897	+				+0.2
3,426,897	+				-0.7
3,426,905	-				+0.5
3,426,945	+		Dshi_3260	0.10	-0.2
3,426,953	-		Dshi_3260	0.11	-0.6
3,426,953	-		Dshi_3260	0.11	-0.0
3,426,963	-		Dshi_3260	0.12	-0.1
3,427,037	+		Dshi_3260	0.21	+0.6
3,427,297	-		Dshi_3260	0.51	+0.1
3,427,297	-		Dshi_3260	0.51	+0.4
3,427,299	+		Dshi_3260	0.51	+0.8
3,427,386	+		Dshi_3260	0.61	+0.2
3,427,407	-		Dshi_3260	0.63	-1.1
3,427,465	-		Dshi_3260	0.70	-0.5
3,427,541	+		Dshi_3260	0.79	+0.6
3,427,549	-		Dshi_3260	0.80	+0.1
3,427,588	+		Dshi_3260	0.84	-0.0
3,427,590	-		Dshi_3260	0.84	+0.7
3,427,596	-		Dshi_3260	0.85	+1.0
3,427,654	-				-1.3
3,427,684	-				+0.0
3,427,696	+				-0.1
3,427,704	-				+0.9
3,427,754	+				-0.1
3,427,765	-				+0.7
3,427,765	-				+1.7
3,427,829	-				+1.3