Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3051
Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. 1-ethyl-3-methylimidazolium chloride 2 mM |
|---|---|---|---|---|---|
| remove | |||||
| 3,218,932 | + | Dshi_3050 | 0.40 | -0.5 | |
| 3,219,106 | - | Dshi_3050 | 0.58 | +0.1 | |
| 3,219,117 | + | Dshi_3050 | 0.59 | +1.1 | |
| 3,219,150 | - | Dshi_3050 | 0.62 | +1.2 | |
| 3,219,301 | - | Dshi_3050 | 0.78 | +0.6 | |
| 3,219,353 | - | Dshi_3050 | 0.84 | +0.9 | |
| 3,219,491 | - | +0.3 | |||
| 3,219,666 | - | -0.6 | |||
| 3,219,667 | - | -0.1 | |||
| 3,219,693 | + | -0.0 | |||
| 3,219,701 | - | -0.4 | |||
| 3,219,943 | + | Dshi_3051 | 0.45 | +0.8 | |
| 3,219,951 | - | Dshi_3051 | 0.47 | +0.2 | |
| 3,221,095 | - | -0.1 |
Or see this region's nucleotide sequence