Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2244

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
2,366,736	-				-0.1
2,366,803	+				+0.8
2,366,824	-				-0.4
2,366,839	-				+0.1
2,366,847	-				-0.4
2,366,930	+				-0.1
2,366,969	+				-1.3
2,366,989	+		Dshi_2243	0.10	-0.7
2,367,003	+		Dshi_2243	0.12	-0.2
2,367,007	+		Dshi_2243	0.13	+0.7
2,367,056	-		Dshi_2243	0.19	-0.3
2,367,106	+		Dshi_2243	0.26	-1.4
2,367,166	-		Dshi_2243	0.34	+0.3
2,367,171	+		Dshi_2243	0.35	+1.0
2,367,234	-		Dshi_2243	0.43	-0.0
2,367,234	-		Dshi_2243	0.43	+0.4
2,367,320	+		Dshi_2243	0.54	+0.0
2,367,328	-		Dshi_2243	0.55	+0.9
2,367,328	-		Dshi_2243	0.55	+1.0
2,367,347	-		Dshi_2243	0.58	+0.4
2,367,375	-		Dshi_2243	0.62	+0.6
2,367,399	+		Dshi_2243	0.65	-0.1
2,367,516	-		Dshi_2243	0.80	-0.9
2,367,516	-		Dshi_2243	0.80	-0.1
2,367,516	-		Dshi_2243	0.80	-0.1
2,367,521	-		Dshi_2243	0.81	-0.1
2,367,630	+				+0.3
2,367,661	+				-0.2
2,367,664	-				-0.2
2,367,754	-				-0.0
2,367,760	+				+1.2
2,367,765	+		Dshi_2244	0.10	-1.8
2,367,797	-		Dshi_2244	0.17	+0.3
2,367,819	+		Dshi_2244	0.22	-0.7
2,367,874	-		Dshi_2244	0.35	+0.3
2,367,879	-		Dshi_2244	0.36	-0.9
2,367,910	+		Dshi_2244	0.43	-0.1
2,367,945	+		Dshi_2244	0.51	-0.1
2,367,945	+		Dshi_2244	0.51	+0.5
2,367,945	+		Dshi_2244	0.51	-0.4
2,367,945	+		Dshi_2244	0.51	+0.3
2,367,953	-		Dshi_2244	0.53	+0.2
2,367,955	+		Dshi_2244	0.53	-0.5
2,367,958	-		Dshi_2244	0.54	+0.6
2,368,005	+		Dshi_2244	0.64	-0.7
2,368,013	-		Dshi_2244	0.66	-0.3
2,368,013	-		Dshi_2244	0.66	-0.3
2,368,013	-		Dshi_2244	0.66	-0.2
2,368,018	-		Dshi_2244	0.67	-1.3
2,368,020	+		Dshi_2244	0.68	-0.0
2,368,023	-		Dshi_2244	0.68	-0.1
2,368,038	-		Dshi_2244	0.72	+0.3
2,368,058	+		Dshi_2244	0.76	-0.0
2,368,080	-		Dshi_2244	0.81	-1.7
2,368,100	-		Dshi_2244	0.86	-0.1
2,368,102	+		Dshi_2244	0.86	+0.0
2,368,102	+		Dshi_2244	0.86	-1.2
2,368,115	-		Dshi_2244	0.89	-0.4
2,368,121	+				+0.2
2,368,160	-				+0.4
2,368,160	-				-0.2
2,368,176	-				-0.1
2,368,182	-				+0.2
2,368,195	-				+0.8
2,368,195	-				+0.0
2,368,200	+				-1.5
2,368,221	+				+0.0
2,368,221	+				+1.0
2,368,229	-				+1.1
2,368,229	-				+0.4
2,368,229	-				-0.5
2,368,229	-				+0.4
2,368,236	-				+1.9
2,368,238	-				-1.2
2,368,238	-				+0.0
2,368,238	-				+0.5
2,368,312	+				+0.8
2,368,317	+				-0.1
2,368,325	-				+0.1
2,368,325	-				+0.5
2,368,357	-				+0.0
2,368,408	-				+0.5
2,368,446	+				+0.2
2,368,446	+				-0.6
2,368,469	-		Dshi_2245	0.13	-0.3
2,368,478	+		Dshi_2245	0.16	-0.8
2,368,484	-		Dshi_2245	0.18	-0.5
2,368,487	+		Dshi_2245	0.18	-0.5
2,368,495	-		Dshi_2245	0.21	-0.3
2,368,520	+		Dshi_2245	0.28	+0.7
2,368,559	-		Dshi_2245	0.39	-0.0
2,368,594	+		Dshi_2245	0.49	+0.2
2,368,599	-		Dshi_2245	0.51	+0.4
2,368,602	-		Dshi_2245	0.51	+0.2
2,368,613	-		Dshi_2245	0.55	-0.2
2,368,630	+		Dshi_2245	0.59	+0.1
2,368,633	-		Dshi_2245	0.60	+0.0
2,368,637	+		Dshi_2245	0.61	+0.0
2,368,641	+		Dshi_2245	0.63	-0.5
2,368,641	+		Dshi_2245	0.63	+0.0
2,368,649	-		Dshi_2245	0.65	-0.3
2,368,660	-		Dshi_2245	0.68	+0.3
2,368,660	-		Dshi_2245	0.68	+1.6
2,368,664	+		Dshi_2245	0.69	-0.4
2,368,664	+		Dshi_2245	0.69	+0.2
2,368,664	+		Dshi_2245	0.69	+0.2
2,368,664	-		Dshi_2245	0.69	-1.3
2,368,666	+		Dshi_2245	0.70	+0.6
2,368,671	+		Dshi_2245	0.71	-0.9
2,368,671	+		Dshi_2245	0.71	-0.3
2,368,671	+		Dshi_2245	0.71	+0.4
2,368,672	-		Dshi_2245	0.72	-0.9
2,368,672	-		Dshi_2245	0.72	-0.1
2,368,672	-		Dshi_2245	0.72	+0.9
2,368,672	-		Dshi_2245	0.72	-0.4
2,368,674	-		Dshi_2245	0.72	-0.3
2,368,674	-		Dshi_2245	0.72	-0.9
2,368,679	-		Dshi_2245	0.74	+0.7
2,368,681	+		Dshi_2245	0.74	+0.0
2,368,689	-		Dshi_2245	0.76	+0.1
2,368,696	-		Dshi_2245	0.78	-0.1
2,368,736	-				-0.1
2,368,738	-				-0.8
2,368,738	-				+0.8
2,368,738	-				-0.4
2,368,740	+				-0.0
2,368,744	+				+0.3
2,368,752	-				+0.5
2,368,752	-				-0.2
2,368,752	-				-0.1
2,368,779	+				-0.5
2,368,779	+				-0.2
2,368,779	+				+0.5
2,368,787	-				+0.1
2,368,787	-				+0.3
2,368,787	-				+0.3
2,368,787	-				+0.2
2,368,787	-				-0.2
2,368,787	-				-0.0
2,368,789	-				-0.1
2,368,789	-				+0.1
2,368,793	+				+0.2
2,368,793	+				-0.1
2,368,810	+				-0.4
2,368,820	+				+0.9
2,368,820	+				-0.7
2,368,820	+				+0.9
2,368,820	+				+0.2
2,368,820	+				+0.4
2,368,821	+				+0.2
2,368,821	+				-0.7
2,368,828	-				-0.4
2,368,829	-				+1.0
2,368,829	-				+0.2
2,368,842	+				+0.5
2,368,848	-				-0.1
2,368,853	+				-0.2
2,368,859	-				-0.5
2,368,860	+				-0.0
2,368,861	-				-0.6
2,368,917	+				+0.2
2,368,924	-				-0.9
2,368,938	+				+0.1
2,368,946	-				-0.9
2,368,949	+				+0.5
2,368,950	+				-0.4
2,368,950	+				-0.7
2,368,950	+				-0.4
2,368,951	-				+0.1
2,368,958	-				-0.2
2,368,958	-				+0.1
2,368,958	-				+1.3
2,368,958	-				+0.1
2,368,958	-				-0.8
2,368,958	-				-0.4
2,368,958	-				+0.1
2,368,960	+				-0.1
2,368,960	+				-0.4
2,368,960	+				+0.5
2,368,960	+				-0.4
2,368,960	+				-0.1
2,368,960	+				+0.2
2,368,960	+				-0.4
2,368,960	+				+0.7
2,368,960	+				+0.2
2,368,968	-				-0.0
2,368,970	+				-0.2
2,368,973	+				+0.2
2,368,978	-				+0.3
2,368,978	-				+0.0
2,368,978	-				-1.7
2,368,980	-				+0.0
2,368,980	-				+0.6
2,368,983	+				-0.3
2,368,994	+				+0.4
2,368,994	+				-0.1
2,368,994	+				+0.1
2,368,994	+				+1.0
2,368,994	+				-0.6
2,368,994	+				-0.4
2,369,002	-				-0.5
2,369,002	-				-0.4
2,369,002	-				+1.1
2,369,002	-				+0.1
2,369,002	-				+0.3
2,369,002	-				+0.7