Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2241

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
2,363,644	+		Dshi_2239	0.82	-0.3
2,363,652	-		Dshi_2239	0.83	-1.4
2,363,652	-		Dshi_2239	0.83	-0.4
2,363,663	-		Dshi_2239	0.84	+1.6
2,363,699	+		Dshi_2239	0.89	+1.1
2,363,704	+				-0.7
2,363,724	+				+1.9
2,363,774	-				+0.9
2,363,807	-				+0.2
2,363,816	+				-0.4
2,363,816	+				-0.1
2,363,824	-				+0.1
2,363,865	-				+0.1
2,363,889	+				-0.9
2,363,921	-		Dshi_2240	0.11	+0.0
2,363,991	-		Dshi_2240	0.22	+1.8
2,364,001	-		Dshi_2240	0.24	-0.4
2,364,006	-		Dshi_2240	0.25	+0.0
2,364,012	+		Dshi_2240	0.26	+1.2
2,364,024	+		Dshi_2240	0.28	+0.0
2,364,060	+		Dshi_2240	0.33	-0.4
2,364,083	-		Dshi_2240	0.37	-0.3
2,364,093	+		Dshi_2240	0.38	-0.8
2,364,101	-		Dshi_2240	0.40	+0.0
2,364,101	-		Dshi_2240	0.40	-0.8
2,364,123	-		Dshi_2240	0.43	-0.2
2,364,125	-		Dshi_2240	0.43	-0.6
2,364,135	+		Dshi_2240	0.45	+0.1
2,364,140	+		Dshi_2240	0.46	+0.5
2,364,143	-		Dshi_2240	0.46	+0.6
2,364,163	+		Dshi_2240	0.49	-0.4
2,364,165	+		Dshi_2240	0.50	-1.5
2,364,170	+		Dshi_2240	0.50	-0.8
2,364,170	+		Dshi_2240	0.50	+0.1
2,364,171	-		Dshi_2240	0.51	-0.3
2,364,178	-		Dshi_2240	0.52	+0.8
2,364,180	+		Dshi_2240	0.52	-0.3
2,364,186	+		Dshi_2240	0.53	+0.4
2,364,188	-		Dshi_2240	0.53	+0.1
2,364,188	-		Dshi_2240	0.53	+0.0
2,364,221	-		Dshi_2240	0.58	+0.3
2,364,259	+		Dshi_2240	0.64	-0.1
2,364,288	-		Dshi_2240	0.69	+0.3
2,364,288	-		Dshi_2240	0.69	-1.0
2,364,288	-		Dshi_2240	0.69	-0.2
2,364,333	+		Dshi_2240	0.76	+0.1
2,364,333	+		Dshi_2240	0.76	+0.5
2,364,333	+		Dshi_2240	0.76	+0.1
2,364,333	+		Dshi_2240	0.76	-0.3
2,364,333	+		Dshi_2240	0.76	-0.1
2,364,341	-		Dshi_2240	0.77	+0.6
2,364,341	-		Dshi_2240	0.77	+0.2
2,364,423	-				-0.2
2,364,428	+				-1.0
2,364,432	+				-1.4
2,364,433	+				-0.2
2,364,433	+				-0.3
2,364,440	-				-0.3
2,364,440	-				-0.2
2,364,440	-				+1.0
2,364,443	+				-0.2
2,364,451	-				+0.3
2,364,451	-				-0.4
2,364,460	+				+0.4
2,364,467	+				-0.5
2,364,467	+				+0.2
2,364,467	+				-0.3
2,364,475	-				-0.9
2,364,501	+				+0.8
2,364,507	-				-1.1
2,364,509	+				-0.1
2,364,509	+				+0.3
2,364,517	-				+0.6
2,364,530	+				-0.4
2,364,530	+				-0.6
2,364,538	-				-0.4
2,364,538	-				+0.5
2,364,538	-				-0.2
2,364,538	-				+0.2
2,364,538	-				+0.0
2,364,538	-				+0.1
2,364,588	+				-0.2
2,364,596	-				-0.6
2,364,598	+				-0.4
2,364,665	-		Dshi_2241	0.16	+0.4
2,364,673	-		Dshi_2241	0.17	-0.3
2,364,675	+		Dshi_2241	0.17	+0.4
2,364,676	+		Dshi_2241	0.17	+0.5
2,364,684	-		Dshi_2241	0.18	+0.6
2,364,689	-		Dshi_2241	0.18	+0.1
2,364,689	-		Dshi_2241	0.18	+1.8
2,364,710	+		Dshi_2241	0.20	+0.1
2,364,714	-		Dshi_2241	0.21	-1.1
2,364,781	+		Dshi_2241	0.27	-0.1
2,364,781	+		Dshi_2241	0.27	-0.3
2,364,893	-		Dshi_2241	0.38	+0.3
2,364,899	+		Dshi_2241	0.39	+0.1
2,364,907	-		Dshi_2241	0.40	+0.0
2,364,907	-		Dshi_2241	0.40	-0.1
2,364,935	-		Dshi_2241	0.42	-0.5
2,364,963	+		Dshi_2241	0.45	-0.1
2,365,027	-		Dshi_2241	0.51	+0.2
2,365,089	+		Dshi_2241	0.57	+0.3
2,365,097	-		Dshi_2241	0.58	-0.4
2,365,097	-		Dshi_2241	0.58	+0.9
2,365,160	-		Dshi_2241	0.64	+0.6
2,365,183	+		Dshi_2241	0.66	+1.0
2,365,217	+		Dshi_2241	0.69	+0.4
2,365,245	+		Dshi_2241	0.72	+0.4
2,365,245	+		Dshi_2241	0.72	+0.4
2,365,303	-		Dshi_2241	0.78	-0.1
2,365,306	-		Dshi_2241	0.78	-0.3
2,365,313	-		Dshi_2241	0.79	-0.5
2,365,381	-		Dshi_2241	0.85	-0.1
2,365,438	-				+0.2
2,365,466	+				+0.3
2,365,563	+				+0.0
2,365,570	-				-1.0
2,365,680	-		Dshi_2242	0.14	+0.2
2,365,761	+		Dshi_2242	0.20	+0.7
2,365,946	-		Dshi_2242	0.34	+0.4
2,365,960	-		Dshi_2242	0.35	-0.5
2,365,977	-		Dshi_2242	0.36	-0.7
2,366,004	+		Dshi_2242	0.38	+0.5
2,366,139	-		Dshi_2242	0.49	+0.4
2,366,167	-		Dshi_2242	0.51	-1.1
2,366,304	-		Dshi_2242	0.61	+0.2
2,366,314	-		Dshi_2242	0.62	+0.5
2,366,391	-		Dshi_2242	0.68	+0.5
2,366,457	+		Dshi_2242	0.73	-0.7
2,366,473	+		Dshi_2242	0.74	+1.2
2,366,499	+		Dshi_2242	0.76	-1.2
2,366,499	+		Dshi_2242	0.76	+0.2
2,366,524	+		Dshi_2242	0.78	+1.5