Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1940

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 2 mM
2,028,580	-		Dshi_1939	0.21	-0.8
2,028,596	-		Dshi_1939	0.23	-0.1
2,028,678	+		Dshi_1939	0.33	+0.4
2,028,866	-		Dshi_1939	0.55	-0.2
2,028,966	-		Dshi_1939	0.68	-0.2
2,028,985	-		Dshi_1939	0.70	+0.6
2,029,024	+		Dshi_1939	0.75	-0.0
2,029,107	-		Dshi_1939	0.85	+0.6
2,029,148	+		Dshi_1939	0.90	+0.1
2,029,154	-				+0.1
2,029,173	-				-0.2
2,029,212	+				+0.3
2,029,261	+				+0.7
2,029,281	+				-0.2
2,029,373	+		Dshi_1940	0.13	-0.7
2,029,518	-		Dshi_1940	0.31	-0.2
2,029,658	-		Dshi_1940	0.48	-0.2
2,029,658	-		Dshi_1940	0.48	+0.4
2,029,774	+		Dshi_1940	0.63	+0.8
2,029,784	+		Dshi_1940	0.64	+0.1
2,030,003	-				+0.0
2,030,041	-				+1.2
2,030,106	+				+0.1
2,030,259	-		Dshi_1941	0.14	-0.1
2,030,313	-		Dshi_1941	0.19	-1.7
2,030,407	+		Dshi_1941	0.28	-0.6
2,030,416	-		Dshi_1941	0.29	+0.9
2,030,574	+		Dshi_1941	0.45	+0.5
2,030,920	-		Dshi_1941	0.79	+0.5
2,030,991	-		Dshi_1941	0.86	+0.0